Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2292 ATGGCATTGCATCTTCAAATGATTTTACCTATCTCATTGGTTCTTGCCATCATTTTATCAGGGCAAAGAACATGCGAGTCAGCCAGAGTATTCACCATAGTAAACTACTGCAAGGAGACCCTATGGCCAGCCGTAATACCCGGGGAAAATTTCAACGGTGGAGGATTCGTCCTTAAACCTGGACAATCCTCCGTGTTTAACGCCCCAATAAGTTGGAGTGGCCGAATATGGGCTAGAACCGGCTGCAAGTTCGACCAAGATGGAAATGGACCATGCGAAACAGGGGCGTGCGGCACCACTTTAAAATGTGGTGGTGGAGGCAAAACCCCAGCATCTCTAGCCGAATTCACACTCGCTCAACCTGATTTCTATGATGTTAGCCTTGTTGACGGCTTCAACGTGCCAATTTCTGTTAAGCCGATAAACGGAAAGGGAAATTGCTCAACGGCTGGTTGTGACTCTGACCTTAGATTAACTTGTCCCAAAGAACTTTCCGTTAAGGCTAACGGAAAGACTGTTGGGTGCCGAAGCGCATGCGATGTGTTTGATACCGATGAGTATTGTTGTAGAGGGAATTTTGGGAATCCTTCTACTTGTAGACCAACTTTTTACTCTAAGAAGTTTAAGGAAGCTTGCCCAACTTCTTATAGTTATGCTTATGATGATCCAACTAGTATCTTCACCTGCACTGGAACAGACTATTTCATTGCTTTCTGTGCTGACAGGAAAAAACAGATGTGCACTTACCATGATCATAACCTTCATTGTAGTGGATCACAAAGCTTAATGTCATTAATTGGAAGCTGGTGGATGGCAATGATAACTGTGTTTTCAATTCTTAGTTTGTGGATTGGATAA 858 0.4371 MALHLQMILPISLVLAIILSGQRTCESARVFTIVNYCKETLWPAVIPGENFNGGGFVLKPGQSSVFNAPISWSGRIWARTGCKFDQDGNGPCETGACGTTLKCGGGGKTPASLAEFTLAQPDFYDVSLVDGFNVPISVKPINGKGNCSTAGCDSDLRLTCPKELSVKANGKTVGCRSACDVFDTDEYCCRGNFGNPSTCRPTFYSKKFKEACPTSYSYAYDDPTSIFTCTGTDYFIAFCADRKKQMCTYHDHNLHCSGSQSLMSLIGSWWMAMITVFSILSLWIG* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2292 285 CDD TLP-PA 30 239 - -
Tpr2g2292 285 PIRSF PR5 1 280 IPR001938 -
Tpr2g2292 285 PANTHER OS03G0233200 PROTEIN 10 253 IPR001938 -
Tpr2g2292 285 Gene3D Thaumatin 30 239 IPR037176 -
Tpr2g2292 285 SMART tha2 31 240 IPR001938 -
Tpr2g2292 285 Pfam Thaumatin family 35 239 IPR001938 -
Tpr2g2292 285 ProSiteProfiles Thaumatin family profile. 28 239 IPR001938 -
Tpr2g2292 285 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Tpr2g2292 285 PRINTS Pathogenesis-related protein signature 54 63 IPR001938 -
Tpr2g2292 285 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Tpr2g2292 285 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Tpr2g2292 285 PRINTS Pathogenesis-related protein signature 122 138 IPR001938 -
Tpr2g2292 285 PRINTS Pathogenesis-related protein signature 230 239 IPR001938 -
Tpr2g2292 285 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 10 253 - -
Tpr2g2292 285 SUPERFAMILY Osmotin, thaumatin-like protein 30 240 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2292 Tpr-Chr2 27479562 27481064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2292 28 246 Receptor kinase-like Gene Family AT5G38280 42.060 1.35e-51 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2292 - - gmx:100813659 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2292 2 27479562 27481064 Tpr2g2292 2 27479562 27481064 ECH