Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2289 ATGAAATCTACGGTTGAAGGATCCATGGTAGCTGAAAGGTTTGATGATGGGGAAAAAGATAAGAAGAAGAGGCGTCGATCTAATCGTCGGAACAAGCAGAATCCTCCTTCATCTTCAGGGTTAGTAACTGAAGTAAATGAGGCCATTGGGGTGTCCGTTGAATGCTCGGGGAAAAATGGAACACCCACTCAATCATCTGGATCCTTTAGCAATTCACTGAAGCAACAGGGTGTTATTGTTTTCCCCTCTAATGAGCAAGAATTATCCAAAGCACCAAGTGTTGAATCCATTTCGATGCCTGTCATGTCTCTTCATGATCAAGGAGTACATGAAGGAGGAATTGTTTCAAAACCATTTTCAGAACCCATTGGTTGCTTAGGATCGTCAACAACATATAAAAAGAATGACTCTTCCCCTTACAATCAAATTGGACTTTCTGGCCAGCGAAATTTTTTTAGTCCACATTGGCCTGTTGAGGCTGTTGAGAAGGCATTGGAGAGGGGTGATGTTTTCAAAGCTGTCTTTCGTGTCAATGCTCACAATAAACTTGAGGCCTACTGCAAAATTGATGGAGTGCCAACAGATATTCTCATTGGTGGGGCTCCAGCCCAGAATAGAGCTGTGGAAGGCGATATGGTTGCAATTAAGCTTGATCCTTTGCCATTGTGGACAAAAATGAAAGGACCAAATGTGACCAACAACAATACTGCAGTACTGGAGGGTTGTAGTAACCTTGTGGAAGATAATGTTGTGGGAGATAACAATGGTGAAGGAAACAGAAGCTGTCCTGCTCAAAGCAAGGGGGAATCTTATCCATGTCTTGAAAAAAGATACATTTATGAGAATAATACTACACAAGGTTTGCCTAACCATTTAAGTTTAATTGGACTAACCGGCTGTGATAACAATGATGATCTTCACTATGATGCATCTGCTTCCTTAAAGATTAATTCTCGTAGCGGACAGAGTGAAGTTATGAATGCAGTGGAGAAGTTGTGTTTGTTGGTTAATTCTTTCCCTTCTAAAAGGCCAACTGGTAGGGTCATTGCTGTTATTGAGAGGTCTCCACGCCGAGAATGTATTATCGGCCATCTTAATGTGAAGCAATGGGTTTTCTTCAGGGACACAAACAAGAAAGATGCAAGAAAGAATAAGAATTTGGTGTCTGAGAATGAATATATCCATCTGAGACCAATTGATCCAAAGTTTCCTAACATAATACTTCTGGTCAGAGAGTTACCAGAGAGCATTGCTAAAAGGCTGAAAAGTGGAGATGGAGCAATTGAAATGGATCTGGTTGCTGCACAAATTGATGATTGGTTTGAAGAAAGTCCTTTTCCTGAGGGACACATCTTGCATATTTTTGGGCGAGGCAGTGAAATTCAGCCCCAACTAGATGCTATTTTGTTTCAGAATGCAATCTGTACGTCTGAATTTTCACCTGAAGCTCTGTCCTGCTTGCCACATGTTCCTTGGGAGTTACCATTAAAGGAATTACAAAATCGAACTGATCTTAGAAATTTGTGCATATTTACTATTGATCCTTCAACTGCAACTGATCTGGATGATGCACTGTCAATTGAGAAGTTGCCTAATGGAAATTATAGAGTAGGCATCCATATTACTGATGCATCATACTTTGTTCTACCAGACACAGCTTTAGATAGGGAGGCAAAGTTTAGGTCAACAAGTGTTTATATGTTGCAAAAGAAGTTGCCAATGTTGCCTGCATTAATCTCAGAAAACATTGGATCACTTAATCCTGGAGTGGATCGACTTGCATTTTCCATGCTCCTAGATCTAAATGTTGATGGGGATGTTGTAGATCGTTGGATTGGTCGTACTGTTATTCAATCTTGTTGCAAGCTTTCATACGAACATGCTCAGGACATCATTGACAGGGATTTTGATTTAGAGAGTTCAACTTTTCATGAAGATGACTATCCTAAAGTGCATGGCCATTTTGATTGGTCTGATGTTATTACTTCTTTGAAGAGTCTCTATGAAATTTCAAAAGTTTTGAAATACAAGAGATTTACTGGAGGGGCTTTGCGGCTTGATAACCCTAAAATTGTTATCCTGTTTGATGAAAATGGCATTCCATATGATAGTACGTTTTCTGAACAGAAAGAATCTAACTTTCTTATCGAGGAATATATGCTTTTGGCCAATACAACAGCAGCCGAAGTAATATGTAAAGCTTATCCTGATGTTGCACTATTGCGGAGGCATCCTGAACCTAATATGCAGAAGCTGAGAGAGTGTACAGCATTTTGTCAGAAGCATGGTTTAAATTTAGACACTTCTTCATCTGGTCATATCCATCGGTCCTTAGAGAAGATAAAGAAAACGCTCAAGGATGACCCTGTGCTTTATGATATATTTATTTCCTATGCTACAAGGCCAATGCAGTTGGCGTCTTACTTCTGTAGTGGTGATTTTAAGGATAATGAACATGAATGGGGTCATTATGCACTAGCTGTCCCTCTATACACTCATTTTACATCACCTTTACGTCGATATCCAGATATTGTTGTTCATCGCACCCTACTTGCCACGATAGAAGCCGAGGAAATATATTTGAAGCAGGTTGGAAAGGAAGTGGGAGCGAAAAAAAGATGTTTCACAGGCACCAACTTTGATAAAAAAGCTGCAGAGTCTGTTGAAGGCATGGAAGCTTTATCAGCTGCAGCTTTGAAGCATAGGGTTCCAAGTGCTGAAACGCTTGCAGTTATTGCTGCCCATTGCAATGAGAGAAAGCGAGCTAGTAGAAATGTTAAGGATGCCTGTGAGAGGCTTTACATATGGTTTCTCCTGAAGCAGCAGAAGGTCATATTATCAGAAGCGAGAATATTGGGACTAGGCCCAAAGTTTATGTCAATTTATATTCAAAAGCTAGCGGTTGAGAGACGCATATATTATGATGAAGTTGATGGTTTAACTGCAGAGTGGCTTGAGGCAACATCCACATTGGTGCTTAGCATATCTCCTAATAAACGTGCATCTAGGAGGGGTGGCGCTAACAAATGGAGATCATTGTCAGACTCTGTGTTGCTTGCTTGTCCATATGACCTGAAAGTTACAACGGATAATTCTAAACAAAATGATGCAATGGAAGTGGATGCTATTGTATCTAACATGGACAAGCAGCACATATCCCAATCTGCAATTGAGCCTGCGTTTTTTCCACTCACTGTGCACCTTCTTTCGACAATTCCAGTTGCACTTCATGCTGTTGGTGGTGATGACGGCCCTCTTGATTTTGGAGTGAGGTTGTACATGAGCTCCTATTTTGTGTAA 3300 0.4052 MKSTVEGSMVAERFDDGEKDKKKRRRSNRRNKQNPPSSSGLVTEVNEAIGVSVECSGKNGTPTQSSGSFSNSLKQQGVIVFPSNEQELSKAPSVESISMPVMSLHDQGVHEGGIVSKPFSEPIGCLGSSTTYKKNDSSPYNQIGLSGQRNFFSPHWPVEAVEKALERGDVFKAVFRVNAHNKLEAYCKIDGVPTDILIGGAPAQNRAVEGDMVAIKLDPLPLWTKMKGPNVTNNNTAVLEGCSNLVEDNVVGDNNGEGNRSCPAQSKGESYPCLEKRYIYENNTTQGLPNHLSLIGLTGCDNNDDLHYDASASLKINSRSGQSEVMNAVEKLCLLVNSFPSKRPTGRVIAVIERSPRRECIIGHLNVKQWVFFRDTNKKDARKNKNLVSENEYIHLRPIDPKFPNIILLVRELPESIAKRLKSGDGAIEMDLVAAQIDDWFEESPFPEGHILHIFGRGSEIQPQLDAILFQNAICTSEFSPEALSCLPHVPWELPLKELQNRTDLRNLCIFTIDPSTATDLDDALSIEKLPNGNYRVGIHITDASYFVLPDTALDREAKFRSTSVYMLQKKLPMLPALISENIGSLNPGVDRLAFSMLLDLNVDGDVVDRWIGRTVIQSCCKLSYEHAQDIIDRDFDLESSTFHEDDYPKVHGHFDWSDVITSLKSLYEISKVLKYKRFTGGALRLDNPKIVILFDENGIPYDSTFSEQKESNFLIEEYMLLANTTAAEVICKAYPDVALLRRHPEPNMQKLRECTAFCQKHGLNLDTSSSGHIHRSLEKIKKTLKDDPVLYDIFISYATRPMQLASYFCSGDFKDNEHEWGHYALAVPLYTHFTSPLRRYPDIVVHRTLLATIEAEEIYLKQVGKEVGAKKRCFTGTNFDKKAAESVEGMEALSAAALKHRVPSAETLAVIAAHCNERKRASRNVKDACERLYIWFLLKQQKVILSEARILGLGPKFMSIYIQKLAVERRIYYDEVDGLTAEWLEATSTLVLSISPNKRASRRGGANKWRSLSDSVLLACPYDLKVTTDNSKQNDAMEVDAIVSNMDKQHISQSAIEPAFFPLTVHLLSTIPVALHAVGGDDGPLDFGVRLYMSSYFV* 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2289 1099 Pfam RNB domain 502 854 IPR001900 GO:0003723|GO:0004540
Tpr2g2289 1099 PANTHER RIBONUCLEASE 38 1097 - -
Tpr2g2289 1099 SUPERFAMILY Nucleic acid-binding proteins 345 474 IPR012340 -
Tpr2g2289 1099 Pfam Dis3-like cold-shock domain 2 (CSD2) 393 472 IPR041505 -
Tpr2g2289 1099 Gene3D - 375 460 - -
Tpr2g2289 1099 SUPERFAMILY Nucleic acid-binding proteins 150 354 IPR012340 -
Tpr2g2289 1099 PANTHER DIS3-LIKE EXONUCLEASE 2 38 1097 - -
Tpr2g2289 1099 ProSitePatterns Ribonuclease II family signature. 823 847 IPR022966 -
Tpr2g2289 1099 SUPERFAMILY Nucleic acid-binding proteins 464 941 IPR012340 -
Tpr2g2289 1099 MobiDBLite consensus disorder prediction 1 44 - -
Tpr2g2289 1099 Hamap DIS3-like exonuclease 2 [DIS3L2]. 22 1074 IPR028591 GO:0000175|GO:0034427
Tpr2g2289 1099 Gene3D - 145 241 - -
Tpr2g2289 1099 SMART RNB_2 502 856 IPR001900 GO:0003723|GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2289 Tpr-Chr2 27425512 27432770 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2289 K18758 - gmx:100817387 1541.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2289 2 27425512 27432770 Tpr2g2289 2 27425512 27432770 ECH