Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2158 ATGAATATCATGTATCTCACTCTTACTACTAATGTGCTAGTAACATTACTTTTACTCTTACCATCACCAACAAACCCAAAACAAATTCCAGTTCCAGTCTTAGCATCACCCACAAACCCAAAACAGATTCCAATTCCAGCAGTATATGTTTTTGGTGATTCACTTGTTGACAGTGGTAACAACAATTATCTTCCAATAGAATCAAATGCAAAATTTCTTCCTTATGGTATAGACTTTGGTGGCAAACCTACTGGTCGATGCACTAATGGAAAAACCGTGGTTGATTACTTAGCTATACATCTTGGACTACCTTTTATTCCTCCATATTTGGGCCTTACAAAGATACAAAGACACAAAATCAAAACTGGCATAAATTTTGCATCTGCTGGTTCTGGCATTCTTCCAGAAACCAACAACAATCTTAGTTTGCCTCTTGACAAACAGATAAAATTATTCGAAAAGTTTATTAAGAATAATTTACCAAATATGTTTGCTGATAAAGTAGAGAGGCATCTATCTGAATCACTGTTTGTTGTCTCCACTGGTGTGAATGACCACTTCACTGCTACCAGAAATTTTCGTGGCTCTAGAAAATTTGACTCCTATCTGCTAAAGGAATTTTCCCTACGCATTCAGAAAATGTACAGCCTAGGAGTTAGAAGGGTTTTTGTGAATAATTTGCCACCAGCTGGGTGCTTTCCATCAAGAGCTGCAAAATCAAGAGCAATAGGAGAATGTAATGAGAAAATAAATAGGGCAATTTCCATTTACAATAGTCATTTGCCGAATTTACTTGGAAAGCTGCAGTCCCAACTTCCGGACTTTACCTTTATTCATTCAGATCTGTATGAGCACCTTATAGGATTAAGGAAAACTGGATATAAATATGGTAAGACATTGATTTATATATAA 912 0.3596 MNIMYLTLTTNVLVTLLLLLPSPTNPKQIPVPVLASPTNPKQIPIPAVYVFGDSLVDSGNNNYLPIESNAKFLPYGIDFGGKPTGRCTNGKTVVDYLAIHLGLPFIPPYLGLTKIQRHKIKTGINFASAGSGILPETNNNLSLPLDKQIKLFEKFIKNNLPNMFADKVERHLSESLFVVSTGVNDHFTATRNFRGSRKFDSYLLKEFSLRIQKMYSLGVRRVFVNNLPPAGCFPSRAAKSRAIGECNEKINRAISIYNSHLPNLLGKLQSQLPDFTFIHSDLYEHLIGLRKTGYKYGKTLIYI* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2158 303 Pfam GDSL-like Lipase/Acylhydrolase 48 284 IPR001087 GO:0016788
Tpr2g2158 303 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 297 - -
Tpr2g2158 303 CDD SGNH_plant_lipase_like 46 297 IPR035669 -
Tpr2g2158 303 Gene3D SGNH hydrolase 38 300 IPR036514 -
Tpr2g2158 303 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 1 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2158 Tpr-Chr2 25846623 25848392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2158 18 297 Acyl Lipid Metabolism Gene Families AT4G10950 35.959 8.40e-48 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2158 - - gmx:100797896 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2158 2 25846623 25848392 Tpr2g2158 2 25846623 25848392 ECH