Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2027 ATGAGGAAGAATGGATGGCAGTTACCTTATCATCCACTTCAGGTGGTGGCTATTGCTGTTTTTTTGGCTCTTGGTTTTGCTTTCTATGTGTTCTTTGCTCCTTTTGTTGGGAAGAAGATTTATCAGTATATTGTTACAGGACTCTACACACCTTTGATTATTTGCGTCTTTGGACTGTACATTTGGTGTGCGGGAGCTGATCCAGCAGATCCAGGGGTTTTTAAGTCGAAAAAGTATCTTAAAATTCCGGACAGCAAAAAGTTTAGTGGATTCAAGGATTCTAAACTAGGAAGGGAAACAAATTCATCGGTGAATGACGGAAATGCTTCAACAATTGGACCAAAATCTGTGGATAAGGAAGCGTTGGGAACTGATGCAAGTTTAAAAGACGCTTCTCTTTCAACAGAGAAGAAGAGTGCATCACCGCGTTCCCCATCCTGTTTTCTATGGCTTTTCTCTCCTTGTGCTTATGTATGTAGCTGCTCTAGTTCACATGAGGATTCTTCTAATCAACATGCAAGTGAAGATGGCATGTTCTACTGCAGTTTGTGTGAAGTTGAGGTCTTCAAGTACAGCAAACACTGTAGAGTTTGCGACAAGTGTGTTGACCGCTTTGATCATCATTGCAGATGGCTTAACAACTGTATTGGTAAAAGGAACTACCGAAAATTTTTCACCCTTATGGTTGCTGCTCTTCTCTTGCTTATTCTTCAATGGTTGACTGGGATAGTTGTGCTTATCTGCTGTTTTCTCAAGAGGAAGGAATTTTCCGTGGATGTATCCTCCAAGTTGGGTAGCAGTTTCTCTCTGGTTCCTTTTGTTATTGTGGTGGCAGTCTGCACGATGTTGGCTATGATTGCTACCTTACCTCTTGTTCAGCTTTTCTTCTTTCATATTCTTCTCATTAAAAAGGGAATCAGCACATATGATTACATCATAGCTTTGAGGGAGCAGGATCAGCAAGGAGTTGGAGGTCAGCAGAGTCCCCAAATGTCACCTGTTAGCTCAATTACTGGACTAAGCAGTGCAAGCTCCTTTTCTACTTTCCATCGCGGTCAATGGTGCACACCCCCACGCATGTTCGTTGATGATCAGTTTGATGTAGTGCCACCAGAAACAGCATCTGTAAGTTCACTTGGAAAGAAGTCAATAAGAGAAGAACCAGTTAAGAAAAAGAATCCTGGAGCAGTCAAAATTAGTCCATGGACATTGGCACGGTTAAATGCAGAAGAGGTTTCAAAGGCTGCCGCAGAAGCGAGAAAAAAATCGAAAATTCTGCAGCCTGTGGTGAGACATAACAACGAGCCGTTCAGACTAGAAGCAGATCATAACTCTGGAAGCAGCGGACGGCGAATGGCCCCAAGGAGACCAGGTAAACGCATTAGATTGCCTGCTGACTTACCAATGGAAGCCTTAACAACATATTCTTCCAGTAATGTCGACAAAGGCTTCAACAGAATATCTAGTCTAGCGCCTCTCCAGCTCGAAACACGGACAAGTGAAGTCGTGTCGAGCTCTGGTGGGATTGTTGCATCTTCTCCAGAGAGCAGTTTTGATTCACCTGATATCCATCCGTTTTGCATGCCTCCGGCCGAAGGCGAATCAGCAAGACGGCTTGCCGCAGCAGGTCTATCTGTTGCTGGTCCGGCGACTCTGAAGGGATTTCCGTTGTCGAGGTCAACTAGTGATGGTTATGATGCATCTGGAGGAGAAGACAGTGACAGGGTTCCTACAAGGATTGTTCATAGATCCTCGACAACAAATTGGAGTAATCTTCTTTTCAATGCTGATCAAGATGAGAGAGCTTTTGAGACAAAGTCATCTAGCTTTTCTCATAATAGAAACTTGTGA 1851 0.4365 MRKNGWQLPYHPLQVVAIAVFLALGFAFYVFFAPFVGKKIYQYIVTGLYTPLIICVFGLYIWCAGADPADPGVFKSKKYLKIPDSKKFSGFKDSKLGRETNSSVNDGNASTIGPKSVDKEALGTDASLKDASLSTEKKSASPRSPSCFLWLFSPCAYVCSCSSSHEDSSNQHASEDGMFYCSLCEVEVFKYSKHCRVCDKCVDRFDHHCRWLNNCIGKRNYRKFFTLMVAALLLLILQWLTGIVVLICCFLKRKEFSVDVSSKLGSSFSLVPFVIVVAVCTMLAMIATLPLVQLFFFHILLIKKGISTYDYIIALREQDQQGVGGQQSPQMSPVSSITGLSSASSFSTFHRGQWCTPPRMFVDDQFDVVPPETASVSSLGKKSIREEPVKKKNPGAVKISPWTLARLNAEEVSKAAAEARKKSKILQPVVRHNNEPFRLEADHNSGSSGRRMAPRRPGKRIRLPADLPMEALTTYSSSNVDKGFNRISSLAPLQLETRTSEVVSSSGGIVASSPESSFDSPDIHPFCMPPAEGESARRLAAAGLSVAGPATLKGFPLSRSTSDGYDASGGEDSDRVPTRIVHRSSTTNWSNLLFNADQDERAFETKSSSFSHNRNL* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2027 616 PANTHER S-ACYLTRANSFERASE 8 518 - -
Tpr2g2027 616 ProSiteProfiles DHHC domain profile. 179 229 - -
Tpr2g2027 616 Pfam DHHC palmitoyltransferase 179 312 IPR001594 GO:0016409
Tpr2g2027 616 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 8 518 - -
Tpr2g2027 616 MobiDBLite consensus disorder prediction 439 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2027 Tpr-Chr2 24337566 24343075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2027 167 310 Lipid Metabolism Gene Families AT4G22750 28.571 2.22e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2027 K20027 - gmx:100803007 967.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2027 2 24337566 24343075 Tpr2g2027 2 24337566 24343075 ECH