Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1960 ATGTTTGATTCTTTGAATGATTTTGTTCATGGAAACATGTCTTTGGCTTTTGATTCTTTGAGGGTTTTCATAAGCAATTATTTGTTCTATTCATTTGGATTGATCCTCAAATACTTCTTCAGGTTTCTTCATTTAGGAGATGCTAAAAAAGCTGTCATAAATTCACCATCACAACAACAACTAGTTGATGGAAATTTTCATGATTCTAAGGTTGATGGTTTCCCAGAAGAGTTGGCTAATTTTCTTTTTTGGAGTGAAGATTCTCATCAAGGTGAAACTGAGTGCTCTGTTTTCATGGATCATGTTCATGAAGAAAAAACAGAGTGCTCTGTTTTAAAGAATATTCACTCCAATTTTCTTGATGATAGTGTGAAAACAGAGGTTTATATGGACAACTCTGTTTCAAAGGAGATTGAATCAGTTTTCTTGGATAGTGAGTTTGAAAATTTTGTAGTTCATGAAGATTGCAAGGAAAATGGAGGAGAAAAAGAAGTGTTTGTTTCAAAAGAGAGTGAATCAAATTTTCAAGAAATTGAAAACAAGAATTTTGTTTCCATGGAGAATGGTTATGATCTATATAATGGTAGTATGAAGATAGATGAAGACAAGGAAGAAGAAAAAGAATTAGGAGATGATATATTGGAGATTGACTCTAATGTTCAAGAAGATGGATGCAAAATTGATGAAAATGAAACAGAGCACTCTGTTTTCGCCGAGAATGATGCAAATGAAGATGGTAAGAAAATAGAGGACTCTGTTTCTAAGGGCAGTGATTCTAATCTTCATGATGTTAGTATGAACAAAGATGAAATTGAAAAAGAGAACTTTGTTTTCGGCGATGAAATTTTCGATCTTCACCATGATAGTAAAATAGCAGAGGAAACAGAGCAAGAAACAGGGGACTCTGTTTTTGTGGATAGTGATACTATAAAAACAATCACAAGTAAGTATGAATTCTTTTCAGCAAAAGATATAAGTGTTTTCGTCGAAGAACCAACGACATTGAGATTCAGTTTTCGACAATTTTACACGAGTCCAGAAGTTTCATCCATTTCTAATAATGCATACAAAGAGTTTTCAAAGCTTGATTTAGAGAAAGACTTTGTAACTGAAAAAGAAGAAGGAAAAGAGGAATCTATTCATTCAAATGATGTTCCATTAGTGTTTGAGAGTGAAACGTTTGGTGTAACTGATTCATCTGATGAAGATTATTTCATTTTCAATGAAAATTCAGTTACATCTGATTCTGAGTCAGAATCATCTTGTTCAAGTGGTTTAATATGGAGCAACACCAATAACAAAATTGATGATTCATTTTCCTATCGGTTTCTTGGTAGCGAAAAATTTGAGTCGGAGATTCGAAAGTTGATGATGAGAGATGAAAAAGTAGAAGGTGTAGAAGAAAACCAATCTTCATTTGATGATAAAGTTTCAAAATTTGAAGTTCATGAAGCTGATTTTGAAAATGAGTATATAGAAATAGAACATGAAATGAAGGGTTTGAAATCATTTCAAGAACATGGTTTTGAAGTGAAAGATCAAAGAGAAGTTATGAAGAAAAGTGAAGAAGCTAAGTTGAATGAGTCAGAATCAGAATCTGATGAAGATGAATTTGAATGGGAGCATGAAGAAATAGTGGAACAATTGAAGTTAGAATTGAAGAATTCAAGACAAGGTGGACTTGCTACAATCATAGAAGAAGTTGAAGATGAAGAAGAACAAGATGAAAAAGAATCACCAAAAGTGTTTGAAGAATTCAAACCAATGAAAATTGAAGTGAAGTTATTAGAACACAAGGATCAAATGAATGAGATTGAAAAAGTTTACAAGAGCTATGCAGAGAAAATGAGGAAACTTGATATCTTGAATTATCAAACCATGCATGCATTAGGTCTACTTCAACTAAAAGACCCTCTTAAATTAATTTCAATACCAAAATCCACCATCTCAAATGCAATAATCTCTCAAAATTTGTGGCCAAGAAAATCAACAAAGATCACATCTGACCCATTTCTAAAACTTGTTCATCAACTTCATAGAGATTTGGAATTGGTATATGTTGGACAAATTTGCCTCTCATGGGAAATTCTATGTTGGCTACACATGAAAGCCATTGAGTTACAACAATATGATTCAAAAGGGTCTCATAGGTATAACCATGTTGCTGGTGAATTTCAACTTTTTCAAGTATTGATGCAAAGGTTCATAGAGAATGAGCCATTTCAAGGTGGACCAAGGATTCAAAATTATGTAAAGAATCGTTGTGTGATTAGAAACCTACTTCATGTTCCAGCTATAAAAGATGATAGTAAAGGGGGTGAGGAGGATCCTACTGCAAGTGGAAGATTGCAAGATATCATCAAGGAATCAATGCGGGTGTTTTGGGAATTTGTCCGAACAGATAATAAAGATAATGGGAATGTGATTTCTAAGGAAATTGGAAGTGATCTTAAAGACCCTGCAATTTCAAATCTTCTAGTGGACATTCGAACACAACTATTGAAGAAGGAGAGAAAGCTGAAGGACATAGTAAGAAGTGGGAATTGCATAGTGAAAAAGTTCCAAAAGCACCATGAGGATCAACTTGATCACGAGCAATTAGTTGCTCAAGTTGGGTTGAAATTGATTTCAAGGGTGATAAACATGTCACAATTAAGAAAAGAACAAGTACTATGGTGTAGTGAAAAGTTGAACGGAATTAAATTTTTAAGCAGGAAGATTGTTCATGTGGAACCTTCTTTTTTGCTTTTTCCATGTTGA 2760 0.3344 MFDSLNDFVHGNMSLAFDSLRVFISNYLFYSFGLILKYFFRFLHLGDAKKAVINSPSQQQLVDGNFHDSKVDGFPEELANFLFWSEDSHQGETECSVFMDHVHEEKTECSVLKNIHSNFLDDSVKTEVYMDNSVSKEIESVFLDSEFENFVVHEDCKENGGEKEVFVSKESESNFQEIENKNFVSMENGYDLYNGSMKIDEDKEEEKELGDDILEIDSNVQEDGCKIDENETEHSVFAENDANEDGKKIEDSVSKGSDSNLHDVSMNKDEIEKENFVFGDEIFDLHHDSKIAEETEQETGDSVFVDSDTIKTITSKYEFFSAKDISVFVEEPTTLRFSFRQFYTSPEVSSISNNAYKEFSKLDLEKDFVTEKEEGKEESIHSNDVPLVFESETFGVTDSSDEDYFIFNENSVTSDSESESSCSSGLIWSNTNNKIDDSFSYRFLGSEKFESEIRKLMMRDEKVEGVEENQSSFDDKVSKFEVHEADFENEYIEIEHEMKGLKSFQEHGFEVKDQREVMKKSEEAKLNESESESDEDEFEWEHEEIVEQLKLELKNSRQGGLATIIEEVEDEEEQDEKESPKVFEEFKPMKIEVKLLEHKDQMNEIEKVYKSYAEKMRKLDILNYQTMHALGLLQLKDPLKLISIPKSTISNAIISQNLWPRKSTKITSDPFLKLVHQLHRDLELVYVGQICLSWEILCWLHMKAIELQQYDSKGSHRYNHVAGEFQLFQVLMQRFIENEPFQGGPRIQNYVKNRCVIRNLLHVPAIKDDSKGGEEDPTASGRLQDIIKESMRVFWEFVRTDNKDNGNVISKEIGSDLKDPAISNLLVDIRTQLLKKERKLKDIVRSGNCIVKKFQKHHEDQLDHEQLVAQVGLKLISRVINMSQLRKEQVLWCSEKLNGIKFLSRKIVHVEPSFLLFPC* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1960 919 MobiDBLite consensus disorder prediction 514 539 - -
Tpr2g1960 919 PANTHER OS09G0413600 PROTEIN 282 919 - -
Tpr2g1960 919 PANTHER OS09G0413600 PROTEIN 4 296 - -
Tpr2g1960 919 Coils Coil 595 615 - -
Tpr2g1960 919 Pfam Protein of unknown function (DUF1666) 680 918 IPR012870 -
Tpr2g1960 919 PANTHER FINGER FYVE DOMAIN PROTEIN, PUTATIVE (DUF1666)-RELATED 4 296 - -
Tpr2g1960 919 PANTHER FINGER FYVE DOMAIN PROTEIN, PUTATIVE (DUF1666)-RELATED 282 919 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1960 Tpr-Chr2 23527325 23532913 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1960 - - mtr:MTR_5g040600 1253.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1960 2 23527325 23532913 Tpr2g1960 2 23527325 23532913 ECH