Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1948 ATGGATTTGGGGATTTCTGATGAGATGTTAGGGACTTTTGCTCCACTTTTAGTTTATTGGATTTATTCTGGTTTTTATGTTGTTTTGGGTTTCTTTGCTGAAGATTATAGGTTACATACAAAACAAGATGAGGATGAAAAGAATTTGGTTTCTAAGTTTGATGTTGTTAAAGGAGTTCTCCTTCAACAAGCAGTTCAAGCTGTTGTTGCAACTCTCTTGTTTGCAGTGACAGGAAGTGATAGCCAAAATAGTACCGATGAGAATGCTTCTCTCCTTGTTTTAGCAAGACAATTTATTACTGCTATGTTGGTAATGGACACATGGCAATACTTTATGCACAGATACATGCATCAAAACAAGTTCCTATACAAACACATCCACTCTCTACATCACAGACTCATCGTTCCTTATTCGTTTGGAGCTTTGTACAATCATCCCATTGAGGGGCTTCTTAATGACACAATCGGTGGAGCTTTATCTTTCCTCCTCTCTGGTATGAGCCCTCGAGCATCCATCTTCTTCTTCTCCTTTGCGACAATTAAAACCGTGGACGATCACTGTGGGTTATGGCTCCCGGGAAACGTGTTCCATATGTTTTTCAGTAATAATTCTGCTTACCACGACGTACACCATCAGCTCTATGGTAACAAGTACAACTTCTCGCAACCGTTCTTTGTTATGTGGGACAAAATCTTGGGTACCTACATGCCATACTCATTGGAGAAGAGGCCAAGTGGTGGTTTTGAATCTAGACCTTGTAAAGTTTACAAGGATGAATGA 780 0.3987 MDLGISDEMLGTFAPLLVYWIYSGFYVVLGFFAEDYRLHTKQDEDEKNLVSKFDVVKGVLLQQAVQAVVATLLFAVTGSDSQNSTDENASLLVLARQFITAMLVMDTWQYFMHRYMHQNKFLYKHIHSLHHRLIVPYSFGALYNHPIEGLLNDTIGGALSFLLSGMSPRASIFFFSFATIKTVDDHCGLWLPGNVFHMFFSNNSAYHDVHHQLYGNKYNFSQPFFVMWDKILGTYMPYSLEKRPSGGFESRPCKVYKDE* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1948 259 Pfam Fatty acid hydroxylase 99 234 IPR006694 GO:0005506|GO:0008610|GO:0016491
Tpr2g1948 259 PANTHER SPHINGANINE C4-MONOOXYGENASE 1-LIKE 2 251 - -
Tpr2g1948 259 PANTHER STEROL DESATURASE 2 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1948 Tpr-Chr2 23403228 23406038 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1948 1 259 Acyl Lipid Metabolism Gene Families AT1G69640 77.220 1.32e-143 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1948 K04713 - gmx:100778076 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1948 2 23403228 23406038 Tpr2g1948 2 23403228 23406038 ECH