Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1945 ATGGGCGCTACTACTACAGTCATGAGATGCTCTCCCGGCAACGCTTTCTTCAGAGCTCTCAAACCCATTTCTCGAAATTCCAATCTTCCCAATTCACTTCCACTCTCTTCATCTTCAACCCCAATCAACAAAGGAACTGGATCAAGGTCTGGTAGTGGTGGAAGGGCATATGATGCATTGCTGTTGGATGCTGGAGGTACTCTCTTGCAATTGGCAAAACCTGTTGAAGAGACTTATGCTACTATTGGATCCAAATATGGTTTGACTGTAAATCCAGCTGAGATAAAGCAAGGATTTAAGAGAGCATTTACTGCCAAATGGCCTGAAAAACTACGTTACCAGGGTGATGGGAGGCCATTTTGGAAATTTGTAGTTTCTGAAGCCACTGGTTGTGGAGACGAAGACTTTTTTGAAGAAGTTTATGAGTACTATGCAAAAGGCGATGCATGGCATCTTCCCAATGGAGCTTTTGAAACAATGACTCTTCTCAAGGATGCTGGAGTTAAGATGGCTGTTGTATCCAATTTCGACTCTCGCTTAAGGAAGCTATTGAAGGATCTTAATGTTTTAAATTTATTTGATGCTGTCATTATATCATCAGAGGTTGGATATGAAAAACCAGACCCAAGAATATTTCAAGCTGCTTTAGATCAAGTAAATGTAGAGGCTTGCAAAGCCTTACACATCGGAGATGATCTAAAGGCAGATAAATTGGGGGCCAACGCTGTAGGCATTGATTGCTGGTTATTGGGTATTGATGTGAAGACATTCTCTGAGATACAAATCCGCATTCTCGACCCAGAGGCATAA 810 0.4185 MGATTTVMRCSPGNAFFRALKPISRNSNLPNSLPLSSSSTPINKGTGSRSGSGGRAYDALLLDAGGTLLQLAKPVEETYATIGSKYGLTVNPAEIKQGFKRAFTAKWPEKLRYQGDGRPFWKFVVSEATGCGDEDFFEEVYEYYAKGDAWHLPNGAFETMTLLKDAGVKMAVVSNFDSRLRKLLKDLNVLNLFDAVIISSEVGYEKPDPRIFQAALDQVNVEACKALHIGDDLKADKLGANAVGIDCWLLGIDVKTFSEIQIRILDPEA* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1945 269 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 57 68 IPR006439 -
Tpr2g1945 269 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 163 176 IPR006439 -
Tpr2g1945 269 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 193 209 IPR006439 -
Tpr2g1945 269 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 211 231 IPR006439 -
Tpr2g1945 269 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 163 244 IPR006439 -
Tpr2g1945 269 PANTHER F14L17.7 PROTEIN 5 267 - -
Tpr2g1945 269 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 57 250 - -
Tpr2g1945 269 SUPERFAMILY HAD-like 57 251 IPR036412 -
Tpr2g1945 269 Gene3D - 73 145 IPR044924 -
Tpr2g1945 269 SFLD Haloacid Dehalogenase 57 250 - -
Tpr2g1945 269 MobiDBLite consensus disorder prediction 28 50 - -
Tpr2g1945 269 PANTHER - 5 267 - -
Tpr2g1945 269 Pfam Haloacid dehalogenase-like hydrolase 134 247 IPR041492 -
Tpr2g1945 269 MobiDBLite consensus disorder prediction 28 51 - -
Tpr2g1945 269 CDD HAD_dREG-2_like 156 266 - -
Tpr2g1945 269 Gene3D - 61 250 IPR023214 -
Tpr2g1945 269 TIGRFAM DREG-2: HAD hydrolase, REG-2-like, family IA 60 249 IPR011949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1945 Tpr-Chr2 23387326 23391126 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1945 - - mtr:MTR_7g039510 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1945 2 23387326 23391126 Tpr2g1945 2 23387326 23391126 ECH