Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1937 ATGGACCCCGATAATCCAGAGTTCAGCTGCGAGGTAAATAAAGGAGGGCCAATAATTGTTCCCACCAGGAAAGAAATTCAGGTTCAGAATATGACGAGCAACAGTATGAACCAAACTATAAAAATATTTATGAGGAGCAGAAATCTAGAGGAGGAATCCATGAAATTAGAAAAGTTTTTGAAGGATTCATGGAAATTTTTGGAGCATGGACTCAATGCAATCTTCCACAAACAGAATGATGATTATATCAGCTTGGAACAACTTTACAGTGAAGCCTATAACATGGTGATTCTAGGACAAGTCACAAGATTGTATATGGTATCAGTTACCATCATGACATCACATGTCAAAGAAATATCAAAATCCATTGAAGAAGCAGGAGAAGGGGACTTCTTTCTGGAAGAACTTAGTAGAAAATGGAATGATTACAAAATGGCTATACAAAACATTGAAAACATACTAATCTATATGGATAGAACTTATGTTAGAAAGAATGATAAAACCCCAATAAGAGATCTTGGATTGAACCTATGGAGAGATAATGTTGTTTATTCTGCACAAATTCAGTCTCAATTACAGAACACTCTTGTTGAATTACTACATGGAGAGCGCATCGGTAAAGTTATTAACAATAAAGCCTTGATAAGGAACATATTTATGATGCTAAAGTATTTAGGTGATTCAGATTATGAGACATCGCTTGAGATTCGTTTTCTTGAAGTTTCGGCTGAGTATTTTAGAGGCGAGTCTCAAAAGTTAATTGAATGTTGTGATTTTAGTGATTATATAAGAAAAGTTAAGAATCATTTGATTGAAGAAATGATTAGAGTGAGCCACTACTCGGATTTCATATGCGGAAAGAAGATTGTTGATGTAATGTGCAAGGAGATGATTGAAAACCGAATAGAAAGTTCTTGGTTAGTAACTTTTTTCCTTGATGACAGATATGAAGATTTAAGAAATGTGTATATGATGTTCACGCATTATGTTTCTGACGGACTCCGTAAATTACAGAAAGTGGTTAGGAACACATGTCAACTGTTTTTAACAGATCCAGAAAGGTTAAAGGATCCTATGGTTTTTGTTCAAGATCTTTTGGATAAGAAAGATAAATATGACAGTATATTAGACTCGTCATTCAACAACGATGAAAAATGTCATGCAGTTTTGAACTCCTTCTTTGAGTACATCATTAACATGAATCTCCATTCGCCAGAGTTTCTTTCATTGTTCTTAGATGTAAAGTTAAGGAAAGGTTTTGAAGGAGTAAATGCGGAGATTATTCTTGACAAGGTGGTGGCGCTTATCAGATTGTTGCATGAAAAAGATATGTTCCTTAAGTACTATAAAAAGCACCTTGCAAAGAGGCTTTTGTTAGGGAAAACAGTTTCTAAAGATGCCGAGAGAAGCCTCGTTGTTAAACTCAAAAGAGTTTGTGGTAACCAATTTGTTGTGTTAGAGAAAATGATTGTTGATATGGAAACCTCAGAAGAAATGTTACAAGGGTTTTATAAAAGCCACACTGAGCTAAGCGATGATCGTAAACTAAGTGTTCAGGTTTTGACCACATCTTTGTGGCCAATATCAAGCACTACACATTCATCATGCAACCTTCCGATCGAAGTCTCAGCACTATATGAGAAGTATAAGTCATATTATCTAGGAATCCACACTCAAAAGAAGCTATCATGGCAAGTAAACATGGGAAATGCAGAGATAATAGCAACATTTGGGAGTGGTCATAAGCACGAGTTACATGTCTCGACCTATCAAATGTGTGTACTAATGTTGTTTAATGATGTTGATCAACTAAGCTACAAGGATATTGCAAAAGCAACCCAAATTAATACTTTGGATTTAATCAAGTGCTTGTATTCCATGGTTCTTGTGAAAGGAAAAAATATAATCAAGAAAGAGCCGATGAATGGACATATTGGTGAGGACGATGTATTCTTTATCAATGACATGTTCAAAAGCAAGTTCTATAAAATTAAGTTAGATTCAGTGGCTGCAGAAAGGGAATCTAAACACGAGAAATTACAAACTCAAAAGAATGTAGAAGATGACAGAAGGCCTCAAATTGACGCAGCAATAATGAGGATTATGAAGTCAAGGAAACAGCTTGATCATAACAATATTATAGCAGAGGTGACAAAGGAAGTAAAGTCATTATTCCTTCCTAATCCAACAGAGATAAAGAAAAGGATTGAATCTCTTATTGAAAGAGATTACTTGGAGAGGGACAATATTGACAATAATTTGTATCGGTATCTTGCATGA 2280 0.3496 MDPDNPEFSCEVNKGGPIIVPTRKEIQVQNMTSNSMNQTIKIFMRSRNLEEESMKLEKFLKDSWKFLEHGLNAIFHKQNDDYISLEQLYSEAYNMVILGQVTRLYMVSVTIMTSHVKEISKSIEEAGEGDFFLEELSRKWNDYKMAIQNIENILIYMDRTYVRKNDKTPIRDLGLNLWRDNVVYSAQIQSQLQNTLVELLHGERIGKVINNKALIRNIFMMLKYLGDSDYETSLEIRFLEVSAEYFRGESQKLIECCDFSDYIRKVKNHLIEEMIRVSHYSDFICGKKIVDVMCKEMIENRIESSWLVTFFLDDRYEDLRNVYMMFTHYVSDGLRKLQKVVRNTCQLFLTDPERLKDPMVFVQDLLDKKDKYDSILDSSFNNDEKCHAVLNSFFEYIINMNLHSPEFLSLFLDVKLRKGFEGVNAEIILDKVVALIRLLHEKDMFLKYYKKHLAKRLLLGKTVSKDAERSLVVKLKRVCGNQFVVLEKMIVDMETSEEMLQGFYKSHTELSDDRKLSVQVLTTSLWPISSTTHSSCNLPIEVSALYEKYKSYYLGIHTQKKLSWQVNMGNAEIIATFGSGHKHELHVSTYQMCVLMLFNDVDQLSYKDIAKATQINTLDLIKCLYSMVLVKGKNIIKKEPMNGHIGEDDVFFINDMFKSKFYKIKLDSVAAERESKHEKLQTQKNVEDDRRPQIDAAIMRIMKSRKQLDHNNIIAEVTKEVKSLFLPNPTEIKKRIESLIERDYLERDNIDNNLYRYLA* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1937 759 SUPERFAMILY Cullin homology domain 398 667 IPR036317 -
Tpr2g1937 759 Gene3D - 671 759 IPR036388 -
Tpr2g1937 759 Gene3D Cullin Repeats 182 298 - -
Tpr2g1937 759 SUPERFAMILY Cullin repeat-like 59 401 IPR016159 -
Tpr2g1937 759 SMART Cullin_Nedd8_2 686 753 IPR019559 -
Tpr2g1937 759 Pfam Cullin protein neddylation domain 689 749 IPR019559 -
Tpr2g1937 759 Pfam Cullin family 64 657 IPR001373 GO:0006511|GO:0031625
Tpr2g1937 759 ProSitePatterns Cullin family signature. 732 759 IPR016157 GO:0006511|GO:0031461|GO:0031625
Tpr2g1937 759 PANTHER CULLIN-3A-RELATED 49 759 - -
Tpr2g1937 759 PANTHER CULLIN 49 759 IPR045093 -
Tpr2g1937 759 Gene3D Cullin Repeats 403 511 - -
Tpr2g1937 759 Gene3D Cullin; Chain C, Domain 2 512 670 - -
Tpr2g1937 759 SMART cul_2 430 577 IPR016158 -
Tpr2g1937 759 Gene3D Cullin Repeats 51 181 - -
Tpr2g1937 759 Coils Coil 133 153 - -
Tpr2g1937 759 Gene3D Cullin Repeats 299 401 - -
Tpr2g1937 759 ProSiteProfiles Cullin family profile. 403 628 IPR016158 -
Tpr2g1937 759 SUPERFAMILY "Winged helix" DNA-binding domain 673 759 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1937 Tpr-Chr2 23304759 23308822 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1937 K03869 - pop:7474232 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1937 2 23304759 23308822 Tpr2g1937 2 23304759 23308822 ECH