Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1903 ATGGCGTTCAAGATCAAGAACCCACATTCTTTCTTCCATCACCACCACTTCATATCAGCTACAACAATCATCATCTTCATCATCATCATCATCATCTTAAACAATTCCCATCAAACCACAGCTTCAAGACTCATCACACAACAACAACCAATTGCAAACCTCATAACAGATAGTAACACATTAGGTCAATGGGTTCAGCTAAAAAAATCCATAGGCATCTCAGCCATGCACATGCAAGTAATGAAAGACAACAAAGTCGTCATTTTCGATCGAACCGATTTCGGCCCATCAAATATCTCCCTACCAAATCACCGCTGCCGTTTTAATCCACGTGATCAGGCACTCAAACTCGACTGCACTGCTCACTCAGTTCTCTACGACATTTCATCAAACACCTTACGTCCATTAACTCTTCAAACCGACGCTTGGTGTTCTTCCGGCTCTGTTTCACCCACCGGAACACTAATTCAAACCGGCGGTTACAACGACGGTTACAACAAACTCAGAACATTCAATCCATGCCCGGAAAGCAACAACTGTGATTGGGAAGAACTTCATCAGAATCTATCTTCAAGTCGTTGGTATGCTTCGAATCAGATTCTTCCAAACGGAAGAATCATCGTCGTCGGTGGTCGTTCTGCATTTTCATACGAATTTGTTCCGAAGAATTTCAACGATGCTTCACATTACTTTTTTCGATTCTTGCAAATTACGCGTGATTCGAATCCTGGTGAAGAAAACAATCTTTACCCTTTCTTGCATCTTTTACCCGACGGAAATCTCTTCATCTTCGCTAATCGGCGTTCGATTTTGTTTGATTATGATCGGAACAGAGTAATAAGAGAATTTCCGATCATTCCCGGAGAAGAAAAGAGAAACTATCCGAGTACTGGTTCATCCGTTATGTTGCCGTTGAATTTGACCGGAAAAAACTCTACGTCGTTGATTGAGGTTGAAATTATGGTTTGCGGTGGTGCGTATCCCGGCGCGTATGATTTTGCTAATAAAAAGAAAGTGTTTCTAGAAGCTTCTAGTAGTTGTGGGAGGTTAAAGGTTAGTGATTCTGAACCGGAGTGGGTTATGGAGATTATGCCGATTCCACGTGTCATGCCGGATATGATTTTGTTACCGACGGGTAATTTGATTATTCTGAATGGCGCCACAAATGGTACTGCTGGTTGGGAAAACGCGGTGAACCCGGTCTTGTGTCCGGTTTTATATCGACCAAATTTGCCCGATCCATTTTTGAGGTTTCAGTTGTTAGCTCCAGCGAGTACGCCGAGGTTGTATCATTCTTCAGCTGTTTTGTTGCCAGATGGGAGGATTTTAGTTGGCGGGAGTAACCCACATAAGCTTTATGATTTTCGGGCGACGTATCCAACCGAGTTGAGTTTGGATGCGTACTATCCAGAATATCTTGGGCCGGAGTTTGTTGCATTGCGACCCAATATTATTGCGGTTGAGGTTGTTAAGAATACAGCATTGCATGGGAGTTTGTTTTCGGTGTCATTTTCGTTAAGGAAAAAGAGTGATTTTAATGGAATTCGTATTTCGATGGTGGCACCTTCATTTACTACTCACTCGTTCGCAATGAATCAAAGGGTTTTGTTTTTAGAAATTACGGGAATAGAGGTGGTTGCGGTTGGTCAAAATTCAGGTGAGTTTGGTCTCGAAAACTCAACAGAAGAAGTTGCGAGTTCGATTTATAAGGCTACTGTTCGTGGGCCCCCTTCTTTTAATGTGGCCCCACCAGGGTATTATATGCTTTATGTTGTCCATGCTGGAGTTCCTAGTGTTGCTACTTGGGTTCATGTTGACTGA 1821 0.4272 MAFKIKNPHSFFHHHHFISATTIIIFIIIIIILNNSHQTTASRLITQQQPIANLITDSNTLGQWVQLKKSIGISAMHMQVMKDNKVVIFDRTDFGPSNISLPNHRCRFNPRDQALKLDCTAHSVLYDISSNTLRPLTLQTDAWCSSGSVSPTGTLIQTGGYNDGYNKLRTFNPCPESNNCDWEELHQNLSSSRWYASNQILPNGRIIVVGGRSAFSYEFVPKNFNDASHYFFRFLQITRDSNPGEENNLYPFLHLLPDGNLFIFANRRSILFDYDRNRVIREFPIIPGEEKRNYPSTGSSVMLPLNLTGKNSTSLIEVEIMVCGGAYPGAYDFANKKKVFLEASSSCGRLKVSDSEPEWVMEIMPIPRVMPDMILLPTGNLIILNGATNGTAGWENAVNPVLCPVLYRPNLPDPFLRFQLLAPASTPRLYHSSAVLLPDGRILVGGSNPHKLYDFRATYPTELSLDAYYPEYLGPEFVALRPNIIAVEVVKNTALHGSLFSVSFSLRKKSDFNGIRISMVAPSFTTHSFAMNQRVLFLEITGIEVVAVGQNSGEFGLENSTEEVASSIYKATVRGPPSFNVAPPGYYMLYVVHAGVPSVATWVHVD* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1903 606 Pfam Glyoxal oxidase N-terminus 76 325 IPR009880 -
Tpr2g1903 606 Gene3D Immunoglobulins 480 606 IPR013783 -
Tpr2g1903 606 PANTHER SECRETED PROTEIN-RELATED 23 605 - -
Tpr2g1903 606 SUPERFAMILY E set domains 480 605 IPR014756 -
Tpr2g1903 606 CDD E_set_GO_C 477 605 IPR015202 -
Tpr2g1903 606 Pfam Galactose oxidase-like, Early set domain 481 605 IPR015202 -
Tpr2g1903 606 PANTHER F14L17.20 PROTEIN 23 605 - -
Tpr2g1903 606 Gene3D - 58 476 IPR037293 -
Tpr2g1903 606 SUPERFAMILY Galactose oxidase, central domain 108 473 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1903 Tpr-Chr2 22740504 22742974 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1903 - - mtr:MTR_5g038410 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1903 2 22740504 22742974 Tpr2g1903 2 22740504 22742974 ECH