Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1898 ATGCATTCTCTCACCTCACCATCTCTTTCCGTGTTTTTTCCTCATCTAAACCTTTCTCTCTTTCACCCTATCATTGTATCGTTCCCCTCTTCAAGGAAGGTGCAAAGAGTTGCGGTTTTAAGCGAGCTTGGTTTGGTTATTGGGGGTGAGAGTTTTTCCCCTAGGAAGGGAAATTTACACACTCAAAAAGGTTTGTGTTGGTCTTGTTCTCGGGTTTTGACACGGTGTAAGAATTGGGACGGAGAATTTTCGTCTTTGGAAGACGAGATTTTGGAGTTCATGCAAAATTCGGATAACCCAGAAAGGTTTCCTACAAAGGAAGAGTTGGTTAAAGCTGGGAGATTGGATTTGGCTGAAGCTATTGTGAAAGAAGGTGGGTGGCTTTCTTATGGGTGGAATTTGAATGATGGGTTTGTTGAAAGGGTTGATTTTGAAGATGGGAGTAGCAGTGAAATTCAAGGGAATGTAACTAGGACTTCTGGGGTTGCTGGTTCTTCTGCTTCTTCATCTTTCGATAACTCTTCTCAATCAGTTGAATCAGTGGAAATAGAAGCTGAGGAGTCTGGCATTGAGGGTATACTAAATCGGCTGGAGAAACACAGAAATAGTTCTTTTGGACGTGGATTTGGAGAGAAAGAAGATTGTATTTCATCTGATAATGATAAAGAGAAGTGGGAACATAGAACTACAACGGATGGAGTAGCTGCCAACCTTGGCAACAGTAGTAGACCATCCTCGTTGAAACCAACAACCATTCGTATCAGTGGTTCCCAGATCAAACTTGACCAGAACGGATCACAATTAGGTTCTGATAATTCAAGAAACTCAATTAAGCCAGAGACATGGAGAAGTTGGATTGTTCAGAGAACTGGTTCTTCAGATGCAGATTTTGAAGATGCGGAAATTATTCCCAGTCAAACTCAGAAAGGAGATGTTAGCGATGTTTATGGACAACCTAAAATCGTCAAAATAGGAGAATTTTCTCACAAAATAAACAGAGAAACAGGATTAGATTCTCTTGACATAATTGGAAATGCAAATGAAAATGACATAAAATCCCGAATCCAGCTTCTGGAATCAGAGCTATCCTCTGTACTTCACACGTTGAGGTCTAACACCAGTGAAGTGACAACGCTGACGGAACAGAAGAACTCTTCGGATAATCTCGAAAAGCTTTCCGATGCTTGGGAATTCCAGGAAACTGAAATCATGAATGCTCAAGCCAGACTGCGTTCGTTACGTGCCAAGCTAGCAGTGTTAGAAGGAAAGATGACATTGGCAATAATGGATGCACAGAAGGCTCTGGATGAGAAGCAGAAGAAGATTGATCATGTCCACAAAGCTTTGAAACTTTTGAAGCCTACTTGTGTAGTTTGGCCTAATATTGCTTCTGAAGTATTTTTGTTAGGGTCATTTGATGGCTGGTCCTCCCAGAGAAAGATGGAGAAATCAAATACTGGTATATTTTCTGTGTATTTGCAACTGTATCCTGGAACATATGAGATCAAGTTCATTGTTGACGGTGAATGGAAAATCGATCCATTGCGTCCAGTGGTCAACAACAATGGCTTTGTGAATAATCTTCTCGTGATTCATGATTGA 1602 0.4095 MHSLTSPSLSVFFPHLNLSLFHPIIVSFPSSRKVQRVAVLSELGLVIGGESFSPRKGNLHTQKGLCWSCSRVLTRCKNWDGEFSSLEDEILEFMQNSDNPERFPTKEELVKAGRLDLAEAIVKEGGWLSYGWNLNDGFVERVDFEDGSSSEIQGNVTRTSGVAGSSASSSFDNSSQSVESVEIEAEESGIEGILNRLEKHRNSSFGRGFGEKEDCISSDNDKEKWEHRTTTDGVAANLGNSSRPSSLKPTTIRISGSQIKLDQNGSQLGSDNSRNSIKPETWRSWIVQRTGSSDADFEDAEIIPSQTQKGDVSDVYGQPKIVKIGEFSHKINRETGLDSLDIIGNANENDIKSRIQLLESELSSVLHTLRSNTSEVTTLTEQKNSSDNLEKLSDAWEFQETEIMNAQARLRSLRAKLAVLEGKMTLAIMDAQKALDEKQKKIDHVHKALKLLKPTCVVWPNIASEVFLLGSFDGWSSQRKMEKSNTGIFSVYLQLYPGTYEIKFIVDGEWKIDPLRPVVNNNGFVNNLLVIHD* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1898 533 MobiDBLite consensus disorder prediction 215 230 - -
Tpr2g1898 533 PANTHER PROTEIN PTST HOMOLOG 2, CHLOROPLASTIC 1 532 - -
Tpr2g1898 533 Coils Coil 403 423 - -
Tpr2g1898 533 MobiDBLite consensus disorder prediction 149 179 - -
Tpr2g1898 533 MobiDBLite consensus disorder prediction 233 275 - -
Tpr2g1898 533 CDD E_set_AMPKbeta_like_N 454 517 - -
Tpr2g1898 533 MobiDBLite consensus disorder prediction 215 275 - -
Tpr2g1898 533 Pfam Glycogen recognition site of AMP-activated protein kinase 454 532 IPR032640 -
Tpr2g1898 533 Gene3D Immunoglobulins 451 532 IPR013783 -
Tpr2g1898 533 PANTHER PROTEIN PTST HOMOLOG 3, CHLOROPLASTIC 1 532 - -
Tpr2g1898 533 SUPERFAMILY E set domains 453 532 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1898 Tpr-Chr2 22602967 22611849 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1898 - - cam:101492605 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1898 2 22602967 22611849 Tpr2g1898 2 22602967 22611849 ECH