Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1879 ATGGAAGAAGAAGAAGGAAGGATCAAATTAGACGGTTGTGGGTACGATGTTACAACTTCCTCTCAGCTCTGCATTTCAGCCATCAACTCCTACTACCATCAGGTTCTCACCTATGGTAGAAAGAGACGTGTGATTCTGGAAGCACTGGTCCATGATAACAATTGTGTCTTAGCAAACACCTTAGCAGCTCATTTTGTTTCCTCTCATTCTTCTCGAGCTACCTCTTTACTTCATGCCGCTAAGTCTCATCTTGAACATGCAACCTTGTACGAGAAACTAGTTTTCGATGCCATCAGTTATTTGATGTCACAAGGTAGAGATGACGATGTAGCTGTTGAGTTGCATTCTAAGCTTCTAAAGGAGTTCCCGAGAGATTTGGTTTCTCTAAAGCGAGCACAAATCTTGTGCTTCTACATGGGCCGACCTGATCTGTCTTTATCCCTCGTTAACCAGGTTCTACCTCAAAACGAAGGAGAAAATTACATATATGGAATGCTTGCTTTTCCTTTGTTGGAGCTTGGACGAATGAAAGACGCCGAGGAGGCTGCCAAAAGAGGATTCGAAATCAACGAGCACGACGGGTGGTCACAGCATGCTTTGTGCCATGTACTTCAGTACGAGTGCCGTTTTAGAGAAGCTGTTAAGTTTATGGAAGAATGTTCGTCATCATGGAGTTCTTCTTCATCTTTTATGTTAACACACAATTGGTGGCATGTAGCACTTTGTTACTTAGAAGGCAGTGCTCCAATGCAGAGCGTGCTCGAGGTATATGACAATTATATATGGAAGGAATTAGACAAAACTGATGCTGCGGCTCCCGAGGTTTACTTAAATGCTGTGGCTCTGCTTCTGCGGTTGTGCGTACGTGATGAATTGGAATTTTTTGGTGATCGACTCCATAAGCTTGCAGATTGCCTTGCTGATCAGGCAAACTGGTATTTAGAGTGGCACCTTGATGTATTGACAGTTTGGGCTTTGGCAAAGACTGGACAAATTTCGAAAGCAGACGATCTTCTAAAGGGATTAAAAGAAAGGATTTCGAGGATGACTAAAAAGAAGCAACAAATAATGCAGAAAGGAATGATGCTTGCAGAAGTACTTTATGCATATGGAAGAGGTAACTACAAATATGGACTAGAACTACTTGGTCCAGATTTTGACGGCAATGATTGCAAGATAATTGGTGCATCTGATGAACAAGTTGATGTATTCAACGAAGTTTGGTACATCATGTTGTTGAACAGCGGAGACGCAACAAAGGCAATTGAAGTAATTGATAAGCGAATCAAGAAGAGAGACGGAACTGCTTTCTTATGGCGTTTGCTGGAGAGAGGATACAAACTAGCAAAGAGACCGGAAGCTGAAATTGCAAATGAGAAAGCCAAGTTTTTCGAGAGTGCTTATTTTAACTAA 1413 0.4197 MEEEEGRIKLDGCGYDVTTSSQLCISAINSYYHQVLTYGRKRRVILEALVHDNNCVLANTLAAHFVSSHSSRATSLLHAAKSHLEHATLYEKLVFDAISYLMSQGRDDDVAVELHSKLLKEFPRDLVSLKRAQILCFYMGRPDLSLSLVNQVLPQNEGENYIYGMLAFPLLELGRMKDAEEAAKRGFEINEHDGWSQHALCHVLQYECRFREAVKFMEECSSSWSSSSSFMLTHNWWHVALCYLEGSAPMQSVLEVYDNYIWKELDKTDAAAPEVYLNAVALLLRLCVRDELEFFGDRLHKLADCLADQANWYLEWHLDVLTVWALAKTGQISKADDLLKGLKERISRMTKKKQQIMQKGMMLAEVLYAYGRGNYKYGLELLGPDFDGNDCKIIGASDEQVDVFNEVWYIMLLNSGDATKAIEVIDKRIKKRDGTAFLWRLLERGYKLAKRPEAEIANEKAKFFESAYFN* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1879 470 Coils Coil 332 359 - -
Tpr2g1879 470 SUPERFAMILY TPR-like 107 230 IPR011990 GO:0005515
Tpr2g1879 470 CDD StaR_like 51 409 IPR033891 -
Tpr2g1879 470 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 38 11 468 IPR033891 -
Tpr2g1879 470 Gene3D Tetratricopeptide repeat domain 53 225 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1879 - - lja:Lj2g3v1349460.1 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1879 2 22377268 22383030 Tpr2g1879 2 22377268 22383030 ECH