Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1875 ATGAAGAAGGTAAAGCTTGAACTGTTCACACTCCCCAATAGACTCACACTGATTCAAATTTTCATGGTGATGATGATTCTCTATATGCTTTTCATGAGCTTTGAAATACCCTTAGCTTTCAAAGCAGGTTTTGGTTCAGAAACTGTTGCTATTGGTTTTCTCACCGACGCAATGCCACTTTTGGCAGAACAAAACCAACAAAAAATTCGACCCTTTAGGCTACCATTGAAGAAAGTTTCAACCTTGAGCTTCAACAAGAGCTTTGAAGGTGTATCAGAGCTTCACAAGGTAGCAAAACATGCTTACATTTCAGGGAAGAAATTATGGGAAGAAGTTGAAAGTGGTAAAGTTAAAAGCTTTTTAACTTCTAAGGTTGAAAACGGTTCAGATTCTTGTCTAAATTCAGTTTCAGTTTCTGGGTTTGAGTTTAGGGAAAAGTTGAAAGGGGTTATGGTTTTGCCTTGTGGGTTGACACTTTGGTCTCATGTTACTGTTGTTGGGACACCACGTTGGGCTCATGGTGAGAGTGATTCAAAGATTGGGGTTGTTCAAGATCGCGATGAAGCGGTTTTGGTTTCGCAGTTTATGATGGAGTTACAAGGTTTGAAAGCTGTTGATAATGAAGAACCACCTAGGATATTGCATTTTAATCCTAGGCTTAAAGGGGATTGGAGTGGGAAGCCTGTTATTGAACAGAATACTTGTTATAGGATGCAATGGGGGACTGCCCTTAGGTGTGAGGGATGGAAGTCTAGAGCTGATGAGGAAACTGTTGATGGACAGGTGAAATGTGAGAAATGGATTCACGATGATGATAATCGATCGGAAGAGTGGAAGGCGACATGGTGGTTGAACAGACTGATGGGGCGAAAAAAGGTTGTGCCCATAGACTGGCCATATCCTTTTGCTGAGGGGAAATTATTTGTTCTCACCATAAGTGCTGGCTTGGAAGGTTACCATGTTACTGTGGATGGGAGGCACGTGACGTCCTTTCCGTATCGCACAGGCTTTGCTCTTGAGGATGCTACTGGACTATCCATAAACGGGGACGTCGACGTGCACAATATATATGCTGCTTCATTACCTACATCACATCCTAGCTTTGCTCCGCAGATGCATCTTGAATTGCTTCCTCAGTGGAAGGCTCCACCTATGCTCGGTGTGAATGTAGAGCTTTTCATTGGTATCCTTTCCGCTGGCAACCATTTTGCCGAACGTATGGCAGTGAGAAAGTCGTGGATGCAACATAAGCTAATCAAATCCTCACATGTTGTCGCTCGGTTTTTCGTAGCATTGCATGGAAGGAAAGATATAAATGTGGAAATAAAGAAAGAAGCCGAGTATTTTGGTGATATTATTATAGTTCCGTACATGGATCATTATGACCTTGTTGTTTTGAAGACCATAGCTATATGTGAATACGGGATTCGCACGGTGGCTGCTAAGTATATCATGAAGTGTGATGATGACACATTTGTTAGAGTGGATTCTGTCATAAGCGAAGCAAGACAAGTTCAAAGTGGTAAAAGCCTTTATATGGGAAATATGAATTACCACCACAAGCCTCTTCGCAACGGAAAATGGGCTGTAACTTACGAGGAATGGGTAGAGGATGAGTATCCTACCTACGCTAATGGTCCGGGTTACATCGTCTCATCTGACATTGCTCGGTTCATTGTATCTGAATTTGAACGGCAAAAATTAAAATTATTTAAAATGGAAGATGTGAGCATGGGAATGTGGGTAGAGCAATTCAACAGCTCAAGAGAAGTGGAGTATGTACACAGCTTTAAGTTCTGCCAATTCGGATGCATTGAAGATTACTACACTGCGCATTACCAATCTCCGAGACAAATGACATGCATGTGGGATAAATTGCAACATCAAGGTAAACCACTTTGTTGCAACATGAGATGA 1917 0.4189 MKKVKLELFTLPNRLTLIQIFMVMMILYMLFMSFEIPLAFKAGFGSETVAIGFLTDAMPLLAEQNQQKIRPFRLPLKKVSTLSFNKSFEGVSELHKVAKHAYISGKKLWEEVESGKVKSFLTSKVENGSDSCLNSVSVSGFEFREKLKGVMVLPCGLTLWSHVTVVGTPRWAHGESDSKIGVVQDRDEAVLVSQFMMELQGLKAVDNEEPPRILHFNPRLKGDWSGKPVIEQNTCYRMQWGTALRCEGWKSRADEETVDGQVKCEKWIHDDDNRSEEWKATWWLNRLMGRKKVVPIDWPYPFAEGKLFVLTISAGLEGYHVTVDGRHVTSFPYRTGFALEDATGLSINGDVDVHNIYAASLPTSHPSFAPQMHLELLPQWKAPPMLGVNVELFIGILSAGNHFAERMAVRKSWMQHKLIKSSHVVARFFVALHGRKDINVEIKKEAEYFGDIIIVPYMDHYDLVVLKTIAICEYGIRTVAAKYIMKCDDDTFVRVDSVISEARQVQSGKSLYMGNMNYHHKPLRNGKWAVTYEEWVEDEYPTYANGPGYIVSSDIARFIVSEFERQKLKLFKMEDVSMGMWVEQFNSSREVEYVHSFKFCQFGCIEDYYTAHYQSPRQMTCMWDKLQHQGKPLCCNMR* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1875 638 Pfam Galactosyltransferase 405 586 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tpr2g1875 638 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 7 638 - -
Tpr2g1875 638 SUPERFAMILY Concanavalin A-like lectins/glucanases 151 357 IPR013320 -
Tpr2g1875 638 SMART Gal_bind_lectin_2 153 358 IPR001079 GO:0030246
Tpr2g1875 638 Gene3D - 142 357 - -
Tpr2g1875 638 Pfam Galactoside-binding lectin 150 357 IPR001079 GO:0030246
Tpr2g1875 638 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 149 359 IPR001079 GO:0030246
Tpr2g1875 638 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 638 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tpr2g1875 638 CDD GLECT 153 356 IPR001079 GO:0030246
Tpr2g1875 638 Gene3D - 388 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1875 Tpr-Chr2 22350471 22354912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1875 5 638 Glycosyltransferase AT1G74800 60.688 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1875 K20843 - gmx:100803219 1092.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1875 2 22350471 22354912 Tpr2g1875 2 22350471 22354912 ECH
Tpr2g1875 2 22350471 22354912 Tpr2g1875 2 22350471 22354912 PCT