Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1859 ATGTCCTCGCGTCGCCACTCACTCAGCGGCCCTCCTCAACTCACCGGCACACCTTCCACTCACGAGCTCCGGCAACGAGTCATCAACTGTCTCAACAAACTCTCCGACAGGGATACACTCGCCGGCGCCACCGTAGAGCTTGAATCCATCGCTAAAACGCTAAACCAAGACTCGTTTTCTTCTTTTCTCTCATGCATTCATAACACTGATTCATCTTCCAAATCACCGGTTCGTAAACAATGTGTTAATCTTTTGAGTCTTCTCTCGCGTTTCCACGGTGATGCTCTTTCTCCTTTTTTGTCTAAAATGATCGCCACCGTCCTCCGACGGTTGCGAGATCCGGATTCCGTTGTAAGATCTGCTTGTGTCGACGCTGTTGCTGAGATGTCGTCGCGCATTACTCGTCCGGCGTTCTCTGTTGCGTTTCTGAGGCCGTTTATGGACGCTTTAGCGATGGAGCAGGACGCGAATGCGCAGATCGGAGCTGCGTTGTGTCTTGCTGCGGCTGTTGAGGCGGCGCCGGAGCCGGATGTGGAGTCGCTCCGGCGTACAACGCTTCCGAGGCTAGGGAAGCTTCTGAAGACTGAGTCGTGTAAGGCGAAGGCGCCGTTGTTGGTGCTGATCGGAAGTGTGGTTGCTGTTGGTGGTGCTTCGAGTCGTGCAGCGATGAACTGGTTGGTTCCGTGTCTTGTTGAGTTCCTCGGAAGTGAGGATTGGACTGTTAGAAAAGCCGCCGCCGAGGCGTTGGGGAAGGTGGCTTCGGTGGAGAAAGATTTGGCGTCACATCATAAGGTTTTGTGTTTGGATTCGTTGCAGAATCGAAGATTTGATAAGGTTAAAGTTGTTAGAGAGACTATGAATCGTTCATTGGATATGTGGAAGGAAGTAAAAGATATTTCTGAAAATGTTCCTGCTCCGGTTAAACCTGCATGTGCTTCAGTAGGCACTGATGATGGTAAAGGTCAGTATGTGACCAAAAGTTCACCCTTTATTGGCTCTAAATCGTCCCAACCAAAGAAAACCGTCCCTTCAATCAGGTCCCCTCCATCTACCATTTCAGTTTTATCCTCTGGCAAAAAAGGGAGTCTTTTAAAGAGTAATGACAAGGACTCAAGAATGGGGACGTTGTACCAGCGGCGGGATCATGACAAATCATCCGATGACAAACTTGAAATGCCAGTATTGAAGTCCTCCCTTTCAAATACGAGTACGACCAACGAAGATGATATTAAAAGGTGTGATCTTGAAGCTTCAAAGTCAGCCTCATATCTGAATGCGACAAATTCAAAAGCTGATGTAAAGCAAGTTTTCTATAGCAAAATATCTGACGAGAAATTGCGGAAGTTTGGTGGTGGTTCTAAAGCTCGTGTAGTTCCATGTTCTGATGATGACCAGCTTGACACAGATGTTACTGCCAACAATGTAAATGATGTTTGTGAAAGCCCACAAGATGTTGAGGATTTGTCTTTGATCCGGGAACAACTTCTTCAAATTGAAAACCAGCAATCAAACCTGTTAGACCTCCTTCAGAGATTTATTGGAACCTCTCAAAATGGGATGAATTCTCTGGAGACACGTGTATATGGTCTAGAGATGGCCTTGGATGAAATATCATATGATTTGGCCGTATCAAGTGGCAGGATTCCCAATAGTGATGCCATAGAAGACATGTGTTGCAAGCTACCTGGTACTGACTTTTTGAGTTCTAAATTCTGGAAGAAGACAGAAAGTCGGTATACAACGCCAAGGTTCTCTTTTGGAAGCTCAACATCAACTAATCTTGTGCATAATGCAACTGATAGAAATGGAAGCAAAGAAATATTAACTACAAATAGCAAAAGATTTCAGCATCGTAGGGATGAGGGTGGATATATTGTGAATCCATTAGCAGAAATTCAAAGCGATTTGAAAGGTCGTTCAGGGCATCATTCGTATAAAATGTCTAAAAACTTTGTTCAAGATGCTGGGAGTGCACAAGGTAACAGTTCCACCAGATTTGACGGCATTCCATCAAGTGGAGTACTGAGAAGCCAAAATATCAGGTCATCTGCGTAG 2055 0.4555 MSSRRHSLSGPPQLTGTPSTHELRQRVINCLNKLSDRDTLAGATVELESIAKTLNQDSFSSFLSCIHNTDSSSKSPVRKQCVNLLSLLSRFHGDALSPFLSKMIATVLRRLRDPDSVVRSACVDAVAEMSSRITRPAFSVAFLRPFMDALAMEQDANAQIGAALCLAAAVEAAPEPDVESLRRTTLPRLGKLLKTESCKAKAPLLVLIGSVVAVGGASSRAAMNWLVPCLVEFLGSEDWTVRKAAAEALGKVASVEKDLASHHKVLCLDSLQNRRFDKVKVVRETMNRSLDMWKEVKDISENVPAPVKPACASVGTDDGKGQYVTKSSPFIGSKSSQPKKTVPSIRSPPSTISVLSSGKKGSLLKSNDKDSRMGTLYQRRDHDKSSDDKLEMPVLKSSLSNTSTTNEDDIKRCDLEASKSASYLNATNSKADVKQVFYSKISDEKLRKFGGGSKARVVPCSDDDQLDTDVTANNVNDVCESPQDVEDLSLIREQLLQIENQQSNLLDLLQRFIGTSQNGMNSLETRVYGLEMALDEISYDLAVSSGRIPNSDAIEDMCCKLPGTDFLSSKFWKKTESRYTTPRFSFGSSTSTNLVHNATDRNGSKEILTTNSKRFQHRRDEGGYIVNPLAEIQSDLKGRSGHHSYKMSKNFVQDAGSAQGNSSTRFDGIPSSGVLRSQNIRSSA* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1859 684 Pfam HEAT repeat associated with sister chromatid cohesion 101 126 IPR026003 -
Tpr2g1859 684 Pfam HEAT repeats 188 284 - -
Tpr2g1859 684 Gene3D - 13 347 IPR011989 -
Tpr2g1859 684 SUPERFAMILY ARM repeat 20 289 IPR016024 -
Tpr2g1859 684 PANTHER TORTIFOLIA1-LIKE PROTEIN 4 3 668 - -
Tpr2g1859 684 MobiDBLite consensus disorder prediction 327 393 - -
Tpr2g1859 684 MobiDBLite consensus disorder prediction 363 391 - -
Tpr2g1859 684 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 3 668 IPR033337 GO:0005874|GO:0008017
Tpr2g1859 684 ProSiteProfiles HEAT repeat profile. 226 264 IPR021133 -
Tpr2g1859 684 MobiDBLite consensus disorder prediction 1 21 - -
Tpr2g1859 684 MobiDBLite consensus disorder prediction 327 362 - -
Tpr2g1859 684 Coils Coil 491 511 - -
Tpr2g1859 684 MobiDBLite consensus disorder prediction 652 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1859 Tpr-Chr2 22127030 22131961 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1859 - - mtr:MTR_5g036950 1022.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1859 2 22127030 22131961 Tpr2g1859 2 22127030 22131961 ECH