Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1838 ATGCTTCCTTTACGCTTAACCGTCGTCGTTTCATCTCTTTTTTTCTGTTGCCTTTTCCAACCATTCTGTCTCGGAATCCGTTCTTTTCCGACCACCGACACAACCACCACCGTCGTCACCACCAACCCATTTCACTTCTCCGAAGCACCCGATTATCGAAACGGAGCGGGTTGCCCCATACCCGAAAACAACAACATCAAAGGATCATGCGACCCATCACTAGTTCACATCGCAATGACACTCGATTCTGGTTACCTACGTGGCAGCATCGCCGCCGTTCATTCCGTTCTCCGTCACTCATCATGTCCAGAAAACGTTTTCTTTCATTTCATTTCCGCTGAGTTCGACCCAGCGAGTCCACGAGTCTTGACTCGTTTGGTAAGATCCATTTTTCCATCACTAAACTTCAAAGTTTACATTTTTCGTGAAGACACGGTGATAAATCTTATTTCATCTTCAATTCGTTTAGCACTTGAAAACCCATTAAACTATGCAAGAAATTATCTTGGTGATATGCTTGATTCATGTGTTGAAAGAGTTATCTATCTTGATTCAGATATTGTTGTTGTTGATGATATTTTCAAACTATGGAGTGTGAAAATGGGTTCAGAAAAAGTTATAGGTGCACCTGAATATTGTCATGCAAATTTCACTAAGTATTTCACTGATGAATTTTGGGTTGACCCATTATTATCAAAAGTATTTGGAACAAGAAAGGCTTGTTATTTCAACACGGGTGTGATGGTAATGGATTTAGTAAAATGGAGAAAAGGGGGGTATAGAAGAAAAATTGAGAATTGGATGGAATTACAGAAGAAAAAGAGGATTTATGAATTGGGTTCATTGCCACCCTTTTTACTTGTTTTTGGTGGGAATGTTGAAGCTATTGATCATAGATGGAATCAACATGGATTAGGGGGTGATAATTTGAATGGTGTTTGTAGATCTTTGCATCCTGGTCCTGTTAGTTTGTTACATTGGAGTGGTAAAGGTAAACCTTGGGTTAGACTTGATGAGAAAAAAGCTTGTCCTTTGGATTCATTATGGGAACCTTATGATCTTTATAAGCCAAGAAATAATCATTTCATGGTTCATCATGGTGGTGGTGATGGGAAAAATCAAGAGATTGATCAACCTTGGAGTTTTTCTTCTTCAATTTTGGTTGGATATGCTCATGATTTGCTATGA 1188 0.3906 MLPLRLTVVVSSLFFCCLFQPFCLGIRSFPTTDTTTTVVTTNPFHFSEAPDYRNGAGCPIPENNNIKGSCDPSLVHIAMTLDSGYLRGSIAAVHSVLRHSSCPENVFFHFISAEFDPASPRVLTRLVRSIFPSLNFKVYIFREDTVINLISSSIRLALENPLNYARNYLGDMLDSCVERVIYLDSDIVVVDDIFKLWSVKMGSEKVIGAPEYCHANFTKYFTDEFWVDPLLSKVFGTRKACYFNTGVMVMDLVKWRKGGYRRKIENWMELQKKKRIYELGSLPPFLLVFGGNVEAIDHRWNQHGLGGDNLNGVCRSLHPGPVSLLHWSGKGKPWVRLDEKKACPLDSLWEPYDLYKPRNNHFMVHHGGGDGKNQEIDQPWSFSSSILVGYAHDLL* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1838 395 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 76 352 IPR029044 -
Tpr2g1838 395 SUPERFAMILY Nucleotide-diphospho-sugar transferases 75 356 IPR029044 -
Tpr2g1838 395 Pfam Glycosyl transferase family 8 76 336 IPR002495 GO:0016757
Tpr2g1838 395 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 9-RELATED 10 360 - -
Tpr2g1838 395 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 10 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1838 Tpr-Chr2 21832671 21834442 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1838 2 356 Glycosyltransferase AT1G70090 71.745 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1838 - - vra:106762685 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1838 2 21832671 21834442 Tpr2g1838 2 21832671 21834442 ECH