Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1809 ATGTCGAATAGTTCGAGGGGTCGAGTTACCATTACTCTTGGACGCAGTGGTCAGGTTGTGAAGAGGGACGTATCTGCTGGGGATGTTGCTTACTCTTCTTCTATGTCTTCAGCTGGGACTAAGCGGTCTGTGAGAGACAGGATTGGAAGTAATGGAGATGGTTCCATGTGGCATGGAAATGGACTCAGCGGCAATAAACGACATCGAGGAGATGTAAGCATGCAAAATGGACTGGATGATCGGCGTATTGGCAAAGATGATCTCCGAATGAAACTCATACAAAAAAGTGCGTCTAGGAGGACCGAAAGTAATGATGGCAGTAAGAGGAATATTGATCTCCGTGAAAAATTGTCAAAGACAGCTCACCCTCCGACAAACAGTTTTAATTCAAAGCAGCGCATGCCTGAACAAAGGGAAACAAGCATGTTCAGACCAGTTTCCTCAGCTAGAAGTTCTGATGATATAATGCGTATGGAATCGATGAGAAGCCCATACTCTCCTTGGACACTGGATCAAATTCGACAAAGATCACCAGATGGGTTTCCAAGTACTTCCAGGGGGATTTCCCCCCAAAGAAATGTTGGAGACCTACAGGGAAGGCCAGTAAACAGGACACATGATGGCGTCAGACCAGTTTCATATGCAGGCAGGGATGTTCATGAAACTTCAAGGCCTCCAAGTGCTGCACCTTCATCTTTCATGTCACGACCCACAATATCTACATTGCCTCCGGTAACTGCTAAGCCTGTAGCCTCTCATCCTAGACAACTTCCTCCATCAAGCAGTGTTGCACAAAGGCCTCCATTTGTGGGCGATGAACAGCAACCACAAACTGTTGATGGCCTGTTACAAATACTGGGACTACAAAAATATCAAATTCTTTTCAAGGCCGAGGAGGTGGATATGACTGCATTGAGGCAGATGGGAGAAAATGACCTCAAGGAGCTTGGAATTCCTATGGGTCCAAGGAAAAAACTTCTTCTTGCACTCATGCCCCGTAAACGTCAACAGTGA 1014 0.4615 MSNSSRGRVTITLGRSGQVVKRDVSAGDVAYSSSMSSAGTKRSVRDRIGSNGDGSMWHGNGLSGNKRHRGDVSMQNGLDDRRIGKDDLRMKLIQKSASRRTESNDGSKRNIDLREKLSKTAHPPTNSFNSKQRMPEQRETSMFRPVSSARSSDDIMRMESMRSPYSPWTLDQIRQRSPDGFPSTSRGISPQRNVGDLQGRPVNRTHDGVRPVSYAGRDVHETSRPPSAAPSSFMSRPTISTLPPVTAKPVASHPRQLPPSSSVAQRPPFVGDEQQPQTVDGLLQILGLQKYQILFKAEEVDMTALRQMGENDLKELGIPMGPRKKLLLALMPRKRQQ* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1809 337 MobiDBLite consensus disorder prediction 120 148 - -
Tpr2g1809 337 Gene3D - 277 337 IPR013761 -
Tpr2g1809 337 SMART SAM_4 271 336 IPR001660 GO:0005515
Tpr2g1809 337 MobiDBLite consensus disorder prediction 175 198 - -
Tpr2g1809 337 ProSiteProfiles SAM domain profile. 274 337 IPR001660 GO:0005515
Tpr2g1809 337 PANTHER OSJNBA0060P14.15 PROTEIN 1 335 - -
Tpr2g1809 337 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 335 - -
Tpr2g1809 337 Pfam SAM domain (Sterile alpha motif) 274 330 IPR001660 GO:0005515
Tpr2g1809 337 MobiDBLite consensus disorder prediction 255 276 - -
Tpr2g1809 337 MobiDBLite consensus disorder prediction 72 119 - -
Tpr2g1809 337 MobiDBLite consensus disorder prediction 225 242 - -
Tpr2g1809 337 SUPERFAMILY SAM/Pointed domain 275 331 IPR013761 -
Tpr2g1809 337 MobiDBLite consensus disorder prediction 30 155 - -
Tpr2g1809 337 MobiDBLite consensus disorder prediction 30 44 - -
Tpr2g1809 337 MobiDBLite consensus disorder prediction 175 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1809 Tpr-Chr2 21393788 21401819 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1809 273 330 Glycosyltransferase AT3G07170 56.897 2.70e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1809 - - gmx:100797199 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1809 2 21393788 21401819 Tpr2g1809 2 21393788 21401819 ECH