Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1763 ATGCTATGCTCTCTAATCCGTTTGCGCCGTAAACCTCCAACCTCGCTTCTTCTTCATCTCTCTAACCGTTTCTCTTCATCTTCCTTTTCCTCATCCACCGCCGCCACCATGGTGGTTGCTCATCCCAAAGACGACGCATACCTATCCGCCACAATCCCGAAACGAATCCAATTATTCGAGTCGATTCAAGCCGAACAACAGACTCGCCGCTTATCACTGTCACCGGATCCGATTAAGGTCACACTTCCCGACGGAACTGTGAAAGAAGCAAAGAAGTGGCAAACAACTCCGTTTGATATAGCTCGTGAAATTTCTAAGAATTTAGCTAATAATGCTCTTATTGCTAAGGTTAATGATGTACTTTGGGATATGAATCGTCCTCTTGAAGAGGATTCTAAGCTTCAGATCTTTAAGTTTGAAGATGATGAAGGTCGTGATACTTTTTGGCATTCTAGTGCTCATATTCTTGGACAGTCTCTCGAGACTGAGTATGGATGCAAGCTTTGCATTGGACCTTGCACTACAAGAGGAGAGGGATTCTATTATGATGCATTTTATGGGGAATTGAGTCTGAATGAGGATCACTTTAAACAAATTAAAGATGGAGCATTGAAGGCTGTTAAGGATAAACAACCCTTTGAGCGCATTGAAGTGACACGTGATCAGGCACTTGAGATATTTTCTGATAATAAATTTAAGGTTGAAATTATCAATGATTTGCCCGCTGACAAGACTATAACAGTGTACAGATGTGGACCCCTCATTGATTTGTGTCGAGGACCACATATTCCTAATACATCCTTTGTCAAAGCAATTGAATGTTTGAAGGCTTCGTCAGCATATTGGAGGGGGGACAAAGATAGAGAAAGTTTACAAAGAGTTTATGGCATATCTTTTCCTGATCAGAAGAGATTAACGGAATATTTGAATCGGCTTGCAGAGGCTAAAAAGTATGATCACAGGATCGTGGGGGTGAAACAGGAGCTTATTTATCATCACGAGTGGAGCCCGGGAAGCTGGTTTTTTCTTCCACACGGTGCTAGGATCTACAACAAACTCATGAACTTCATTCGAGACCAGTACAGAGACAGGGGCTATCAAGAGGTTATATCACCGAACGTCTTTAACATAGAGCTGTGGAATACATCTGGTCATGCGGAAAAGTATAAAGATGACATGTTTGTCCTAGAGATTGACAAACAAGAGTTTGGATTGAAACCAATGAATTGCCCAGGACACTGCTTGATGTTTAAACACAGGGTTCGATCATATAGAGAACTTCCTCTTCGTTTCGCTGATTTTGGGGTCTTGCATCGAAATGAGGCCAGTGGTGCCCTGAGTGGATTAACACGAGTTAGGAGATTTCAGCAGGATGATGCACACATTTTCTGCATGGAGTCCCAGGTAAAAGATGAAGTCAGAAATGCCTTGAACTTCATCGATTATGTCTATCAAATATTTGGGTTCACATATGAATTGAAACTTTCAACGAAGCCAGAGAATGCCCTTGGTGATGATGCAACATGGGAGAGGGCTGAAAATGCTCTTAAGGAAGCTTTGGACGAGTTTGGCAAACCTTGGCAGTTGAATGAAGGGGATGGTGCATTTTATGGACCAAAGATAGACATTAGTGTTTCTGATGCATTGAGTAGGAAATTCCAGTGTGCAACTCTACAGCTTGACTTCCAGCTCCCTGATCGTTTTAAGCTGGAATTCTCAGCTGAGGATGAAGCCAAAATTGAGAGACCTGTTATGATACACAGAGCCATTCTAGGATCTGTTGAACGCATGTTTGCTATACTTTTAGAGCACTACAAGGGTAAATGGCCATTCTGGCTCAGTCCTCGTCAAGCAATTTTGTGCCCTGTGTCTGAGAAATCACAGGCTTATGCGCTTCAGGTACGGGATCAGATCCACCAAGCAGGGTATTACGTAGATGCTGATACAACTGATAGGAAGATTCAGAAGAAGGTACGAGAAGCTCAGTTAGCACAGTACAACTACATCTTGGTTGTTGGAGAAGAGGAAGCTAATACCGGACAGGTGAGTGTACGAGTCAGGGACAAGGCAGACCATAGCGTTATGAATATTGAGAATTTGCTCAAACACTTCAAAGACGAGGTTGCAGCTTTCCACTGA 2139 0.4278 MLCSLIRLRRKPPTSLLLHLSNRFSSSSFSSSTAATMVVAHPKDDAYLSATIPKRIQLFESIQAEQQTRRLSLSPDPIKVTLPDGTVKEAKKWQTTPFDIAREISKNLANNALIAKVNDVLWDMNRPLEEDSKLQIFKFEDDEGRDTFWHSSAHILGQSLETEYGCKLCIGPCTTRGEGFYYDAFYGELSLNEDHFKQIKDGALKAVKDKQPFERIEVTRDQALEIFSDNKFKVEIINDLPADKTITVYRCGPLIDLCRGPHIPNTSFVKAIECLKASSAYWRGDKDRESLQRVYGISFPDQKRLTEYLNRLAEAKKYDHRIVGVKQELIYHHEWSPGSWFFLPHGARIYNKLMNFIRDQYRDRGYQEVISPNVFNIELWNTSGHAEKYKDDMFVLEIDKQEFGLKPMNCPGHCLMFKHRVRSYRELPLRFADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCMESQVKDEVRNALNFIDYVYQIFGFTYELKLSTKPENALGDDATWERAENALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAILCPVSEKSQAYALQVRDQIHQAGYYVDADTTDRKIQKKVREAQLAQYNYILVVGEEEANTGQVSVRVRDKADHSVMNIENLLKHFKDEVAAFH* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1763 712 SMART tRNA_SAD_4 246 295 IPR012947 GO:0004812|GO:0005524|GO:0043039
Tpr2g1763 712 SUPERFAMILY Class II aaRS and biotin synthetases 319 602 IPR045864 -
Tpr2g1763 712 Gene3D - 141 299 - -
Tpr2g1763 712 CDD ThrRS_core 319 615 IPR033728 -
Tpr2g1763 712 SUPERFAMILY TGS-like 78 138 IPR012676 -
Tpr2g1763 712 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 246 295 IPR012947 GO:0004812|GO:0005524|GO:0043039
Tpr2g1763 712 Pfam Anticodon binding domain 617 706 IPR004154 -
Tpr2g1763 712 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 398 605 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Tpr2g1763 712 Hamap Threonine--tRNA ligase [thrS]. 143 710 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Tpr2g1763 712 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 344 610 IPR006195 -
Tpr2g1763 712 SUPERFAMILY ThrRS/AlaRS common domain 141 317 IPR018163 GO:0000166
Tpr2g1763 712 SUPERFAMILY Class II aaRS ABD-related 603 708 - -
Tpr2g1763 712 Pfam TGS domain 78 138 IPR004095 -
Tpr2g1763 712 Gene3D Bira Bifunctional Protein; Domain 2 301 608 IPR045864 -
Tpr2g1763 712 CDD ThrRS_anticodon 615 705 - -
Tpr2g1763 712 CDD TGS_ThrRS 78 143 - -
Tpr2g1763 712 TIGRFAM thrS: threonine--tRNA ligase 149 707 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Tpr2g1763 712 ProSiteProfiles TGS domain profile. 76 138 IPR004095 -
Tpr2g1763 712 PRINTS Threonyl-tRNA synthetase signature 405 433 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Tpr2g1763 712 PRINTS Threonyl-tRNA synthetase signature 438 461 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Tpr2g1763 712 PRINTS Threonyl-tRNA synthetase signature 539 567 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Tpr2g1763 712 PRINTS Threonyl-tRNA synthetase signature 583 596 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Tpr2g1763 712 PRINTS Threonyl-tRNA synthetase signature 610 622 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Tpr2g1763 712 Gene3D - 609 711 IPR036621 -
Tpr2g1763 712 Gene3D - 76 137 IPR012675 -
Tpr2g1763 712 PANTHER THREONINE-TRNA LIGASE 38 711 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Tpr2g1763 712 PANTHER THREONINE--TRNA LIGASE, CYTOPLASMIC 38 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1763 Tpr-Chr2 20841933 20854236 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1763 K01868 - gmx:100802879 1269.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1763 2 20841933 20854236 Tpr2g1763 2 20841933 20854236 ECH