Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1761 ATGAATCCGTTCTCTTCAGGAACGCGTTTGAGGGACATGATTCGGGCAATACGTGCATGCAAGACTGCAGCAGAAGAGCGTGGTGTTGTAAGAAAAGAATGTGCAGCCATTCGTGCTTCAATAAATGAAAATGACCAAGATTACAGGCATCGTAATATGGCTAAGCTAATGTTCATTCATATGCTTGGGTACCCGACACATTTTGGTCAAATGGAGTGTCTCAAGTTGATAGCGTCCCCAGGATTTCCGGAGAAGAGAATAGGTTATCTTGGCCTCATGTTGCTTCTTGATGAAAGACAAGAAGTTCTAATGCTGGTCACCAATTCTTTAAAACAAGATCTTAATCATACAAATCAGTATATAGTGGGACTTGCACTTTGCGCTTTAGGAAACATTTGTTCAGCAGAAATGGCTCGTGATCTTGCACCAGAGGTTGAGAGATTGCTACAATTTCGTGATCCCAATATTCGGAAGAAGGCAGCATTATGCTCTATAAGGATCATAAAAAAAGTTCCAGACTTGGCAGAGAATTTTATCAATCCTGCTACTTCCTTACTTAGGGAGAAACACCATGGAGTTTTGATCACTGGGGTTCAGCTTTGTACAGATCTGTGTAAAACTAGCACCGAAGCTCTTGAACATATTAGGAAGAAGTGCACAGATGGTTTGGTCAGATCTCTCAGAGATCTAGCGAACAGCCCTTATTCACCAGAGTATGATATTGCTGGCATCACAGATCCATTTCTCCACATTAGGTTGCTTAAGCTTTTGCGAGTGTTAGGTGAAGGTGATGCTGATGCTAGTGACTCTATGAATGACATACTTGCCCAGGTGGCTACAAAAACTGAGTCAAATAAAGTTGCAGGGAATGCCATTTTATATGAGTGTGTTCAAACAATAATGAGCATTGAAGATAATGGTGGTTTACGCGTACTAGCCATCAATATCCTGGGAAGATTCTTGTCAAACCGTGACAACAATATCAGATACGTGGCACTAAATATGCTAATGAGGGCTGTAACTGCTGATGCTCAGGCAGTGCAAAGGCACCGTGCAACAATTCTAGAATGTGTGAAGGATTTAGATGCTTCAATTCGGAAAAGAGCCCTTGAACTTGTATATGTTCTGGTGAATGAAACTAATGTGAAGCCATTAGTGAAAGAGCTTGTAGATTATCTGGAAGTCAGTGATCTTGATTTCAGAGAGGACCTTACTACCAAAATATGCTCCATAGTTGCAAAATTTTCCCCAGAGAAGATCTGGTACATTGATCAGATGCTAAAGGTTCTGTCTGAGGCTGGAAATTTTGTAAAAGATGAAGTGTGGTATGCCTTAATTGTTGTGGTAAGCAATGCTTCTGAGCTTCATGGATATACAGTAAGAGCATTATACAGGGCATTTCAAACATCTGCTGAACAGGAAACTCTAGTTCGAGTTACAGTGTGGTGCATTGGGGAGTATGGTGACATGCTAGTCAATAATATTGGAATGCTTGACATAGAAGATCCAATAACAGTGACCGAGTCAGATGCAGTGGATGTTGTAGAGATTGCTATAAAACGCCATGCATCAGATCTTACCACAAAAGCAATGGCTTTGGTTGCCTTATTAAAGCTCTCTTCACGTTTCCCGTCTTGTTCAGAGAGGATTGGGGAAATTATTGTACAGTTCAAAGGGAATCTTGTGCTAGAATTGCAGCAGAGAGCTATTGAATTCAATTCAGTTATTTCTAAGCACCAAAATATTAGATCTACTCTCGTAGAAAGGATGCCAGTTTTGGATGAGGCCACTTTCATAGGTAGGAGGGCTGGGTCTTTGCCAGGTGCCGCTTCTACAGCAACTGCGCCTTCAGTTAGTCTCCCGAATGGGTTAGCCAAACCTGCCGCTCCTCTTGTAGATCTCCTTGATCTAAGTTCAGATGATCCTGTAGCACCTAGCTCTTCTGGTGGCGATTTTCTTCAGGACCTTCTTGGTGTTGATCTGTCACCAGCATCACAGCAATCCGGTGCTGGTCAAGCATCAAAAAGTGGCACGGATGTTCTTTTGGATCTCTTATCTATCGGGTCACCTGTCCAGAGCAACTCAGTAGACATCTTATCCTCAAATACTAGTAACAAAGCTCCTGTTTCACCATTGGATGATCTCTCATCACTTTCACTTTCTTCAAGATCTGCATCAAATGCTGGTCCTGTGATTGATTTATTGGGTGGTATTTCCTCCAGCCCACCAACAGAAAACAATGGACCAGTTTATCCATCTGTAACTGCTTTTGAGAGCAGCTCCTTGAGGTTGACGTTCAATTTCACAAAACAACCGGGAAATCCACAGACAACAGTTATCCAGGCTACCTTTACGAATTTGTCCTCCAATACATATACTGATTTTGTTTTCCAGGCAGCCGTTCCTAAGTTTCTTCAATTGCACTTAGATCCAGCTAGTGGCAATACTCTCCCTGCTACTGGAAATGGGTCCATCACGCAAACTTTGAGAGTTACTAATAGCCAGCATGGAAAGAAATCTCTTGTCATGCGCATAAGGATAGCATACAAGATAAATGGCAAGGATACACTGGAGGAAGGACAAATCAGTAATTTTCCTCGTGATTTATGA 2610 0.4199 MNPFSSGTRLRDMIRAIRACKTAAEERGVVRKECAAIRASINENDQDYRHRNMAKLMFIHMLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIIKKVPDLAENFINPATSLLREKHHGVLITGVQLCTDLCKTSTEALEHIRKKCTDGLVRSLRDLANSPYSPEYDIAGITDPFLHIRLLKLLRVLGEGDADASDSMNDILAQVATKTESNKVAGNAILYECVQTIMSIEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLMRAVTADAQAVQRHRATILECVKDLDASIRKRALELVYVLVNETNVKPLVKELVDYLEVSDLDFREDLTTKICSIVAKFSPEKIWYIDQMLKVLSEAGNFVKDEVWYALIVVVSNASELHGYTVRALYRAFQTSAEQETLVRVTVWCIGEYGDMLVNNIGMLDIEDPITVTESDAVDVVEIAIKRHASDLTTKAMALVALLKLSSRFPSCSERIGEIIVQFKGNLVLELQQRAIEFNSVISKHQNIRSTLVERMPVLDEATFIGRRAGSLPGAASTATAPSVSLPNGLAKPAAPLVDLLDLSSDDPVAPSSSGGDFLQDLLGVDLSPASQQSGAGQASKSGTDVLLDLLSIGSPVQSNSVDILSSNTSNKAPVSPLDDLSSLSLSSRSASNAGPVIDLLGGISSSPPTENNGPVYPSVTAFESSSLRLTFNFTKQPGNPQTTVIQATFTNLSSNTYTDFVFQAAVPKFLQLHLDPASGNTLPATGNGSITQTLRVTNSQHGKKSLVMRIRIAYKINGKDTLEEGQISNFPRDL* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1761 869 PANTHER AP-1 COMPLEX SUBUNIT GAMMA 5 869 - -
Tpr2g1761 869 Pfam Adaptin C-terminal domain 752 866 IPR008152 GO:0006886|GO:0016192
Tpr2g1761 869 SMART alpha_adaptinc2 746 866 IPR008152 GO:0006886|GO:0016192
Tpr2g1761 869 Pfam Adaptin N terminal region 27 579 IPR002553 GO:0006886|GO:0016192|GO:0030117
Tpr2g1761 869 PIRSF AP1_gamma 6 869 IPR017107 GO:0005794|GO:0016192|GO:0030121
Tpr2g1761 869 Gene3D - 2 594 IPR011989 -
Tpr2g1761 869 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 5 869 - -
Tpr2g1761 869 SUPERFAMILY Clathrin adaptor appendage domain 724 868 IPR013041 -
Tpr2g1761 869 ProSiteProfiles Gamma-adaptin ear (GAE) domain profile. 749 866 IPR008153 -
Tpr2g1761 869 Gene3D - 738 868 - -
Tpr2g1761 869 SUPERFAMILY ARM repeat 25 593 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1761 Tpr-Chr2 20817171 20832572 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1761 K12391 - gmx:100802164 1504.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1761 2 20817171 20832572 Tpr2g1761 2 20817171 20832572 ECH