Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1737 ATGGCGGATTCATCCCCTTCTCCCGCAACCCTAGAACCCAATCCTCAGCCCAATTCCGAACCACCACCTCCCAATTCCACCCCTAATCAACCCGATCCAATTCCCCAATTATCACAACCGCAATCCCAATCTCAATCCCAATCGCAATCTTCAACACCGTCATCAACGCCTCTTCCTACAAACCCTAATTCCAATCCACCGTTAGCTACTGTACCGTCACTGCCTCCTCCGCCTGCCGTATTATATGCTCCGCCGCAAATTCCCGGTGTTCTTCCTCCATCGGCGCCGTCGTTCCGGCCGCTTGGTGCTCAAGTTCCGCAGTTCACTCCTTTGCCAAATCCCGCTGGTGGTTACCAAAACCCTAATCAACCTCCTGGAGTAGGTGGATCAACGGTGCCGGTGCCTGTTCCGATGCCGCAGATGCAACCGATGATGTCGTATCAAATTCCGGGGAGTAATCCTGCAATGCGTCCTTATGCTCCGATCCCAAACGGTTACGCCATGCATCCTCAAGGAACTCTAAACCCTGCGGGAATTCCTCGTTATGCACCTCCTTATGGAACTATGGTTCGTCCTGTATATCCTCCACGCCTGCCTGGAGCAATCAATGTACTTCCAGTATCACGCCCGCCTGTTGCAGGGATCCCACCACTTCGCCCTATTATTCCTCCTGTTGTCAGACCTGTGGTTCCTCCTAGTGTTACTCCGGCTGAGAAGCAACATACCACTGTTTACATTGGCAAGATTTCACCAACTGTGGAAAATGAGTTCATGCTTTCTCTCCTTAAATTATGCGGGAATATCAAGAGCTGGAAAAGGCCTCAGGATTTATCAAGTGGGACTCCTAAAAGTTTTGGGTTTTATGAGTTTGAGACTGCCGAAGGTGTTCTCCGTGCTTTACGTCTCCTTACCAAATTGAATATTGATGGACAAGAACTAATGATCAATGTAGATGAAGCGATGAGAAACTATCTGGAGCAGTATGTACAAAAAAAAACTGAGGACTCAAAAGAAAAGGAAACTCGGGCAACAGAAATTGAAAAGGATGATAAAGTTGCAAAACCTTCTGATGTAAATGAGGATGCAAAGCCTGATGTGGAGAACTCAAATAAGGAGGAGGGTAATGATTCGGGAAACAAGAAATCCCATGACGTGGCAACTTTTGGGATTGTTACAGATGAAGATAGGGAAGTTGACCGGGATGCTTTAGATAAGATCAAGATGATGATTGAGGAGAGGTTGAAGACAAGACCTTTGCCTCCACCACCTCCACCGCCAATTGGTGATGGTTCTGTTGATTCAACTTCCGAACAACCTACTAAAACAAGAGGAGACTCAGATGTGGATACAAAGAAGATTGAACCAGCTGAAGATAAAAATGAAAGAGAGTCAAACAGTGATAACAAACCAACTGGTGAACACGATAGACCCGAAACCCCTGACAGAAGGCACGACAGGAAAAGCAGGGAGAGAGACCGAGAAAGGGAACTGAAACGAGAAAAGGAAAGAGAACTTGAAAGATATGAAAGAGAAGCTGAGCGGGAACGTATTCGAAAAGAGAGGGAACAAAAACGGAGGATTGAGGAGGTTGAGCGTCAGTTTGAAGCACATTTGAAGGAATGGGAGTATAGAGAAAGAGAGAAAGAGAAAGAACGTCAGTATGAAAAGGAGAAGGAGAAGGACAGGGAACGCAAAAGGAGAAAGGAAATACTTTATGATGAAGAGGAGGATGATGGGGATTCTAGGAAGAGATGGCGTAGAAATGCGATGGAGGAGAAGAGAAAGAAGAGGCTGCGAGAAAAGGAAGATGACCTGGCTGATAGACAAAAAGAAGAGGATGAAATTGCTGAGGCCAAGAAGAGGACTGAGGAGGATAAACAACTTATGAGGCAGAGAGATGCATTGAAGCTGTTGACAGAGCATATTGTAAATGGCAGTGATGAAACTACGGCTACCAAAGAGATTGCTAATGAAATAAAGAACGAGGTTGCTGAACAAGACACTGTAGCTGATTATAGTCATGGTCATATTGGTGATGGTAATGTACTATATACTATCAAAGATGAATCAGCCGTGGCATCTGTAGCCACAACTGATACACAGTCAAGTGGAAATGCTCCTATGAAGAAATTGGGATTTGGTCTGGTTGGCTCTGGAAAAAGAACAACTGTCCCTTCTGTTTTCCATGAAGATGAAGACGACGAAGCGCACAAGGATAAAAAGTTGAGGCCTTTGGTTCCAATTGATTACTCAACAGAGGAATTGCAGGCTGTTGAACCTACTGCTTCTGGGCCAACACCGCCCAATTTGGCTGCAGCTGCAGAGTTTGCAAAGCGTATATCTAATTCCAATTTCAAGGAAGAGCGGCTGGATGGAGAACGAGATAGAAGTAGGCATTCAGATGAGAAGTCTAACCACCGGGACAGGGATAGGAGTGAAGACGGCAATCATCACAGAGATGAACACAGGGATAAAAATTCTGAACGTGACAGGGATCGAGATCATGTGTCGGAGAAACACAAGACTCATGATAACAGACGACTTTTGGATGCAAAAGCAAAACAGTTAATTGATATGATACCAAAGACCAAGGAGGAATTGTTCTCATATGAAATAGACTGGGCAGTGTATGACAAGCATCAATTACATGACAGACTGAGACCGTGGATTTCAAAGAAAATCAAAGATTTTTTGGGGGAAGAAGAAAATACATTGATAGACTATATTGTTTCAAGTACACAAGAACATGTGAAAGCATCTCAAATGCTAGAGCGTCTTCAGATCATTTTAGATGACGAGGCTGAAATGTTCGTACTCAAGATGTGGAGGATGCTTATCTTTGAAATAAAGAAGGTAGAGACAGGGCTTGCTGTGAAGTCCAAATCATGA 2889 0.4465 MADSSPSPATLEPNPQPNSEPPPPNSTPNQPDPIPQLSQPQSQSQSQSQSSTPSSTPLPTNPNSNPPLATVPSLPPPPAVLYAPPQIPGVLPPSAPSFRPLGAQVPQFTPLPNPAGGYQNPNQPPGVGGSTVPVPVPMPQMQPMMSYQIPGSNPAMRPYAPIPNGYAMHPQGTLNPAGIPRYAPPYGTMVRPVYPPRLPGAINVLPVSRPPVAGIPPLRPIIPPVVRPVVPPSVTPAEKQHTTVYIGKISPTVENEFMLSLLKLCGNIKSWKRPQDLSSGTPKSFGFYEFETAEGVLRALRLLTKLNIDGQELMINVDEAMRNYLEQYVQKKTEDSKEKETRATEIEKDDKVAKPSDVNEDAKPDVENSNKEEGNDSGNKKSHDVATFGIVTDEDREVDRDALDKIKMMIEERLKTRPLPPPPPPPIGDGSVDSTSEQPTKTRGDSDVDTKKIEPAEDKNERESNSDNKPTGEHDRPETPDRRHDRKSRERDRERELKREKERELERYEREAERERIRKEREQKRRIEEVERQFEAHLKEWEYREREKEKERQYEKEKEKDRERKRRKEILYDEEEDDGDSRKRWRRNAMEEKRKKRLREKEDDLADRQKEEDEIAEAKKRTEEDKQLMRQRDALKLLTEHIVNGSDETTATKEIANEIKNEVAEQDTVADYSHGHIGDGNVLYTIKDESAVASVATTDTQSSGNAPMKKLGFGLVGSGKRTTVPSVFHEDEDDEAHKDKKLRPLVPIDYSTEELQAVEPTASGPTPPNLAAAAEFAKRISNSNFKEERLDGERDRSRHSDEKSNHRDRDRSEDGNHHRDEHRDKNSERDRDRDHVSEKHKTHDNRRLLDAKAKQLIDMIPKTKEELFSYEIDWAVYDKHQLHDRLRPWISKKIKDFLGEEENTLIDYIVSSTQEHVKASQMLERLQIILDDEAEMFVLKMWRMLIFEIKKVETGLAVKSKS* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1737 962 CDD RRM_RBM25 242 325 IPR034268 -
Tpr2g1737 962 Coils Coil 588 628 - -
Tpr2g1737 962 MobiDBLite consensus disorder prediction 387 414 - -
Tpr2g1737 962 MobiDBLite consensus disorder prediction 10 35 - -
Tpr2g1737 962 Coils Coil 484 540 - -
Tpr2g1737 962 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 242 322 IPR000504 GO:0003723
Tpr2g1737 962 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 35 961 - -
Tpr2g1737 962 MobiDBLite consensus disorder prediction 331 380 - -
Tpr2g1737 962 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 35 961 - -
Tpr2g1737 962 SMART rrm1_1 243 316 IPR000504 GO:0003723
Tpr2g1737 962 Coils Coil 544 564 - -
Tpr2g1737 962 MobiDBLite consensus disorder prediction 545 627 - -
Tpr2g1737 962 MobiDBLite consensus disorder prediction 1 70 - -
Tpr2g1737 962 SMART pwi_2 878 951 IPR002483 GO:0006397
Tpr2g1737 962 MobiDBLite consensus disorder prediction 440 529 - -
Tpr2g1737 962 ProSiteProfiles PWI domain profile. 865 962 IPR002483 GO:0006397
Tpr2g1737 962 MobiDBLite consensus disorder prediction 331 529 - -
Tpr2g1737 962 Gene3D - 234 353 IPR012677 -
Tpr2g1737 962 MobiDBLite consensus disorder prediction 36 58 - -
Tpr2g1737 962 SUPERFAMILY PWI domain 883 950 IPR036483 GO:0006397
Tpr2g1737 962 SUPERFAMILY RNA-binding domain, RBD 225 318 IPR035979 GO:0003676
Tpr2g1737 962 MobiDBLite consensus disorder prediction 783 847 - -
Tpr2g1737 962 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 244 313 IPR000504 GO:0003723
Tpr2g1737 962 Pfam PWI domain 885 948 IPR002483 GO:0006397
Tpr2g1737 962 Gene3D PWI domain 839 958 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1737 K12822 - gmx:100809428 1107.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1737 2 20536256 20542174 Tpr2g1737 2 20536256 20542174 ECH