Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1711 ATGCAACAAGAGTTAGAGGTATGGAAGGAACAAGCTTCTCATATGTGGAATGTGGCAAATGATTATCTTCGCGAGGTTCCTCCCAATCAGCTCTATGCCGCTGCTGCTATTGCGCTTTTCACAACCCTGCTTCTTCTCTTACTGCGGCTTTTGAAGCGCACTAAGTCTAACACCATTGTGTTGACGGGACTTAGTGGGAGTGGGAAAACCGTTATCTTCTATCAGCTTAGGGATGGCTCTACTCACCAGGGTACTGTTACATCAATGGAACCTAATGAAGACACTTTTATTCTTCATAGCGAAACAACGAAGAAGAAGATAAAACCGGTTCATATTGTTGATGTTCCTGGACATTCTCGTCTTCGACCCAAATTGGATGAGTACTTGCCTCTAGCAGCTGGCATAGTCTTTGTTGTTGATGCTTTGGACTTCTTACCAAATTGCCGTGCTGCCTCAGAGTACCTATATGATCTGTTAACTAAGGGAAGTGTTGTGAGGAAGAAGATTCCACTGCTTATTCTCTGCAACAAAACCGACAAAGTCACTGCTCACACCAAAGAATTTATCCGCAGACAAATTGAGAAAGAAATCGACAAATTACGGGTATCAAGAAATGCAGTTTCAGATGCTGACGTTACAAATGAGTTTACTTTGGGGGTACCTGATGAGCCATTTTCCTTTACACAGTGCGCTAACAAAGTTACAACTGCAGATGCTTCTGGTTTAACCGGGGAGTTATCTCAGCTAGAAGAGTTTATCAGAGAACACGTGAAGCCATAA 780 0.4295 MQQELEVWKEQASHMWNVANDYLREVPPNQLYAAAAIALFTTLLLLLLRLLKRTKSNTIVLTGLSGSGKTVIFYQLRDGSTHQGTVTSMEPNEDTFILHSETTKKKIKPVHIVDVPGHSRLRPKLDEYLPLAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTDKVTAHTKEFIRRQIEKEIDKLRVSRNAVSDADVTNEFTLGVPDEPFSFTQCANKVTTADASGLTGELSQLEEFIREHVKP* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1711 259 ProSiteProfiles small GTPase Arf family profile. 50 253 - -
Tpr2g1711 259 Gene3D - 51 257 IPR027417 -
Tpr2g1711 259 Pfam Signal recognition particle receptor beta subunit 55 234 IPR019009 -
Tpr2g1711 259 CDD SR_beta 57 255 IPR019009 -
Tpr2g1711 259 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 259 IPR019009 -
Tpr2g1711 259 PANTHER TRANSFERRIN 1 259 - -
Tpr2g1711 259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 205 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1711 Tpr-Chr2 20263887 20268358 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1711 3 259 Miscellaneous Gene Families AT5G05670 70.270 1.09e-131 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1711 K12272 - gmx:100800572 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1711 2 20263887 20268358 Tpr2g1711 2 20263887 20268358 ECH