Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1654 ATGAAGTTCATGAAACTTGGATCTCGTCCAGATACTTTCTATACTTCAGAAGCTATAAGGACTATCTCTTCTGAAGTTTCTAGTGACCTTATAATTCAAGTAAGGGGAAGTAGATATCTTCTTCACAAGTTTCCCCTGCTGTCGAAATGCTTATGTCTGCAAAGATTATGCTCAGAATCACCTCCTGATTCATCTCATCACCAAATAGTCCAACTTCCTGATTTTCCTGGTGGAGTGGAAGCATTTGAGTTATGTGCTAAGTTCTGCTATGGAATCACCATTACTTTGAGTCCTTACAACATTGTAGCTGCAAGATGTGCTGCTGAATATCTTCAAATGACTGAAGAAGTTGAGAAAGGAAACTTGATTAACAAGCTTGAGATTTTTTTCAATTCTTGTATCCTCCATGGTTGGAAGGATACCATAGTGAGTCTTCAGACCACAAAAGCGTTGCATTTGTGGTCTGAAGACTTAGGAATTACCAGCAGATGCATTGAAACTATTGCGTCGAAAGTCTTGAGGCACCCTACAAAAGTGAGTTTGTCACATAGTCATTCTAGAAGGGTGAGAGATGATATATCTTGCAATGACACAGAAAGTTTGAGAACCAAATCAGGAAGTAAAGGATGGTGGGCTGAAGATTTAGCAGAACTTAGCATAGACCTTTATTGGAGAACCATGATAGCAATCAAATCTGGTGGCAAAGTTCCTTCAAATCTCATTGGTGATGCATTGAAAGTTTATGCATCTAGATGGTTACCAAATATTTCCAAGAATGGAAATAGAAAGAAGAATGTTTCACTAGCCGAGTCTGAATTAGATGACTCGGCCAGTGAAATAACTTCAAAGCATAGACTGCTTTTGGAGTCAATAGTAAGCTTGCTTCCAACCGAAAAAGGCGCTGTTTCTTGTAGCTTTCTTTTGAAACTCTTGAAAGCATCAAATATTCTCAATGCTTCTTCATCTTCAAAGATGGAATTAGCAAGAAGGGTGGGACTTCAACTGGAAGAAGCCACAGTGAATGATCTATTGATACCCTCACTTTCATATACAAATGAGACTGTCTATGATGTTGAATTGGTGATGACTATATTGGAACAATTCATGTTACAAGGACAAAGTCCTCCAACTAGCCCTCAAAAATCCTTGAACACATTTGAAAGAAGGCGGTCTCGCTCCGCGGAGAATATTAACTTTGAATTACAAGAGAGTAGAAGATCATCTTCAGCATCTCATAGTTCAAAATTGAAGGTTGCAAAGCTTGTGGATAGGTACCTTCAAGAAGTTGCAAGAGATGTGAATTTTTCTTTGTCTAAATTCATTGCCCTTGCTGATATTATACCAGATTTTGCAAGACATGATCATGATGATCTCTATAGAGCCATTGACATTTATCTCAAGGCTCATCCAGAACTAAACAAGAGTGAAAGAAAAAGATTATGCAGAATTCTTGACTGCAAAAAACTCTCAATGGAAGCATGCATGCATGCAGCACAAAATGAACTACTTCCATTAAGAGTAGTTGTCCAAGTTCTCTTCTTTGAACAAGCAAGAGCAGCAGCATCAGGTGGAAAAGTAACAGAATTACAAAGCAATATCAAAGCTTTGCTTACAACACACGGTATTGATCCATCGAAACATACAACAACACAATTAAGCACTACTACAAGTATTCAAGGTGAAGATAATTGGAGTGTTTCTAACTTCAAGTCACCAAAATCAAGATCTTCAACACTAAGAATGAAGCTAGCTGAAGATCATGATGAATTTGATGAAAATGGTTTGGTAAATGATGATGGAATTGGAAGAAACTCTAAATTTAAGTCCATTTGTGCTCTTCCTACACAGCCTAAGAAAATGCTTAGTAAATTATGGTCTACTAATAGAACTACTACTGAAAAAAATTGA 1908 0.3737 MKFMKLGSRPDTFYTSEAIRTISSEVSSDLIIQVRGSRYLLHKFPLLSKCLCLQRLCSESPPDSSHHQIVQLPDFPGGVEAFELCAKFCYGITITLSPYNIVAARCAAEYLQMTEEVEKGNLINKLEIFFNSCILHGWKDTIVSLQTTKALHLWSEDLGITSRCIETIASKVLRHPTKVSLSHSHSRRVRDDISCNDTESLRTKSGSKGWWAEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKVYASRWLPNISKNGNRKKNVSLAESELDDSASEITSKHRLLLESIVSLLPTEKGAVSCSFLLKLLKASNILNASSSSKMELARRVGLQLEEATVNDLLIPSLSYTNETVYDVELVMTILEQFMLQGQSPPTSPQKSLNTFERRRSRSAENINFELQESRRSSSASHSSKLKVAKLVDRYLQEVARDVNFSLSKFIALADIIPDFARHDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAAASGGKVTELQSNIKALLTTHGIDPSKHTTTQLSTTTSIQGEDNWSVSNFKSPKSRSSTLRMKLAEDHDEFDENGLVNDDGIGRNSKFKSICALPTQPKKMLSKLWSTNRTTTEKN* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1654 635 SUPERFAMILY POZ domain 22 117 IPR011333 -
Tpr2g1654 635 ProSiteProfiles NPH3 domain profile. 209 518 IPR027356 -
Tpr2g1654 635 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 633 - -
Tpr2g1654 635 Gene3D Potassium Channel Kv1.1; Chain A 14 121 IPR011333 -
Tpr2g1654 635 Pfam NPH3 family 210 494 IPR027356 -
Tpr2g1654 635 PANTHER OS12G0117600 PROTEIN 1 633 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1654 Tpr-Chr2 19535469 19539527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1654 26 590 EF-hand Containing Proteins AT3G44820 33.503 3.71e-91 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1654 - - gmx:100797361 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1654 2 19535469 19539527 Tpr2g1654 2 19535469 19539527 ECH