Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1496 ATGTCTTGTTCAAATTCTCCAGAAGGAGTTGAAAAACAAGAGAATCAAATGAATTCATCTTCAATGGTGAATTCAATTTCCGAAACAGTTGAAACTGCTCAACCTGGTTCTCCGTTGCCTGATTGTGACGGAGTTTTCGTTCAACCTGTTCCTCTAATTGACGACTCTCCTCCGCCGTTAACCGACGGTGTTCAGGAGGGAGATCCAAGGCAGTCAGTTACTTATGAAGTCAACAATGGTGCTGATTCGTCTTTGATTTGGCCGGAGGCGGTGGATCGCCAGGAGTGTCGTCCTCTGAATTCGTCGCGGGTTTTGGCTGTGCAGCCGGAGGCTTGGGTACCGGCGGATTCTGCTGATGATAGTTGGGTGTATGAGGATCTTTTACAGGATTTAATTTATGAATCTGATTCTAAAGCTGTACCGTCGATAATTGGCGCTGGGTTTGCCAACCTTGGTAATACATGCTTTCTCAATTCAATTATGCAATGCTTCACGCATACGGTGCCCCTATTGGAATCTATTATTGATTGCAGCCACTCATATGAAGATCGTCATAATGGGTACTGTGTTATTTGTGCTTTCCGCTACCAGATGGTACATTCCTTGCAGTCTACTGGAAGAGTCGTCTCGCCTTATATACTTGTGGATAATTTGCATCATTTTAATAAGAGTTTTAGAAGATATCAGCAAGAGGATGTACACGAGTTTATGACGTGTGCATTGGATGAACTTGATTCATGTTTTTTAAATCTGAAGAAGAATAATCCAAATTTTGAGGACGATAATATTGTTAAGAAAGTTTTTGGTGGCAGTCTGGTTAGCAAGCTCCGATGTTGTAACTGTGGTCGCTCTTCTGACACTGATGATCCAATTATTGACTTGAGCTTACAATTAGGAAATGTAGATGCTCTTTCAAGTGCTTTAGAATGTTTCACTATGGTGGAAAACATGGACGGAAAGTTTAAATGTGAGGGCTGCAACGAGGAAGTGTCTAAGGAGAAACGGCTTATGTTGGGTCAGACACCTACTATTGCTGCATTCCATTTAAAGAGGTTTAAGACAGATGGGATTTTAGTTGAAAAGATTGACAAGTATATCAGTTTTCCTTTGGAGTTGGACTTGCAACCCTACACCATTTTGAATGAAAACAATGATGTATCATTGAAATATGATCTATATGCAGTTGTTGTGCATACTGGATTTTCACCTACGTCCGGTCATTACTTCTGCTTCATTCGCACTGCTCCAGACACATGGCATAAATTTGATGATTCAAAGGTTACTAAGGTATCCGAAGAGAATGTGCTGTCTCAGGAAGCATACATGCTGTTTTATGCTCGACAGGGTACACCTTGGTTTTCAAAATTTGTAGAAACTAGGAGTCAAGTCTTGGAACAGTGTAATACGTCTCCCAAGTCTGTTTTAGACATCACGGATGGCCAGGATAAATCATGTCCTACTTTAAATAGAAATATGGAGAGGAGTGGCGCTGGGGAATCCAAAGAATTGACAGATGGCCAGAATAAATCATTTCCTATTTTAAATGGAAATATTGAGAGGAGTGGGGATGGTGAATCCAAAGAATTTCCCAAGAAGTTTGATTATTCGGGTCGACAAAGTCGCGAGTTTCTTGAAACTGATGAGGTTATTTATGCTTCACCTTGCCGTGAACAATTTCCTGCCAGGCCATCAAGTCAGAAAACTCTTAATTTGAAGGGATTGGAAGATATAAATGCCCAAGTGCAACCTTTGAATAGTACCAGCTTGCCTAATATTGCAAAGTCTGGTGGGAGTTCATATGCTGAGAATGGTGCTCCTGATAAAAACAAATGCAATCAGGATGTTTTTGATTTTATAGAGAATGACGGTTTCAATCCTCTAACTCCTCCCAACTCGCCCCCTTATCAGACTCCACCAGGTAAGAGTTTCCAGATCTCACGCGATCATTTGAAGACTGAGAATCAAGGGAGCTGTAAAAGATCATCATCAAATAAGTCTAATAAGTCCAATAAGTCAGCAGATAGTGCTGAAACAAAAGCTGCCATCACATATCTTAAGAAGATGCGTGGTTCGAGTTCGAGGAGATGTGCACTAATGGAATACCTTGATGCTAGTCCCAGCAACAGCAAAGGCTCCTCTGAGAACAAGAGAAAAAAGACTGATTCATCGCAGTCTGACAAAGGTAACAACAGTGCTCGCAAGAAATCAAGCCATGCTTCTGTCGCCGCCTACCCTGTGGCAGCCGGAATTTCACAGTGA 2259 0.4161 MSCSNSPEGVEKQENQMNSSSMVNSISETVETAQPGSPLPDCDGVFVQPVPLIDDSPPPLTDGVQEGDPRQSVTYEVNNGADSSLIWPEAVDRQECRPLNSSRVLAVQPEAWVPADSADDSWVYEDLLQDLIYESDSKAVPSIIGAGFANLGNTCFLNSIMQCFTHTVPLLESIIDCSHSYEDRHNGYCVICAFRYQMVHSLQSTGRVVSPYILVDNLHHFNKSFRRYQQEDVHEFMTCALDELDSCFLNLKKNNPNFEDDNIVKKVFGGSLVSKLRCCNCGRSSDTDDPIIDLSLQLGNVDALSSALECFTMVENMDGKFKCEGCNEEVSKEKRLMLGQTPTIAAFHLKRFKTDGILVEKIDKYISFPLELDLQPYTILNENNDVSLKYDLYAVVVHTGFSPTSGHYFCFIRTAPDTWHKFDDSKVTKVSEENVLSQEAYMLFYARQGTPWFSKFVETRSQVLEQCNTSPKSVLDITDGQDKSCPTLNRNMERSGAGESKELTDGQNKSFPILNGNIERSGDGESKEFPKKFDYSGRQSREFLETDEVIYASPCREQFPARPSSQKTLNLKGLEDINAQVQPLNSTSLPNIAKSGGSSYAENGAPDKNKCNQDVFDFIENDGFNPLTPPNSPPYQTPPGKSFQISRDHLKTENQGSCKRSSSNKSNKSNKSADSAETKAAITYLKKMRGSSSRRCALMEYLDASPSNSKGSSENKRKKTDSSQSDKGNNSARKKSSHASVAAYPVAAGISQ* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1496 752 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 390 408 IPR018200 GO:0004843|GO:0006511
Tpr2g1496 752 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 110 468 - -
Tpr2g1496 752 Pfam Ubiquitin carboxyl-terminal hydrolase 147 445 IPR001394 GO:0004843|GO:0016579
Tpr2g1496 752 SUPERFAMILY Cysteine proteinases 146 447 IPR038765 -
Tpr2g1496 752 MobiDBLite consensus disorder prediction 656 677 - -
Tpr2g1496 752 MobiDBLite consensus disorder prediction 649 678 - -
Tpr2g1496 752 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 147 162 IPR018200 GO:0004843|GO:0006511
Tpr2g1496 752 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 110 468 - -
Tpr2g1496 752 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 146 448 IPR028889 -
Tpr2g1496 752 Gene3D Cysteine proteinases 145 452 - -
Tpr2g1496 752 MobiDBLite consensus disorder prediction 1 39 - -
Tpr2g1496 752 MobiDBLite consensus disorder prediction 1 34 - -
Tpr2g1496 752 MobiDBLite consensus disorder prediction 697 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1496 Tpr-Chr2 17663558 17667687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1496 141 447 Miscellaneous Gene Families AT4G31670 35.443 6.51e-52 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1496 K11855 - gmx:100808015 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1496 2 17663558 17667687 Tpr2g1496 2 17663558 17667687 ECH