Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1490 ATGGCAATGAGCAACAACATCATAGGATTCATAAACCTACTTGCTGTAATAATCTCAATCCCAATCATTGGTGCTGGAATCTGGCTAACAAACGAACCAGCAGACACATGTATCAAATTTCTCCAATGGCCAGTAATAATCCTAGGTGTTCTTCTCTTAATTGTCTCTCTAGCTGGTCTCATTGGTTCTTTTTGGAGAATATCATGTCTTCTCATATTCTACCTAGTTGCTATGCTTGTTCTCATTATACTTCTTGTTTGTTTGGTTGTTTTTGTTTATATGGTCACTGTTCGTGGTCATGGTATGATTGAACCTAATAGAGCTTATTTGGAATATCGTTTGGATGATTTTTCTGGGTTTTTGAAAAGAAGAGTTAGAAGTTCTTTTAAATGGGATGCTATTAGGAGTTGTCTTAGTGAAACTAATATGTGTGCTGAGTTGAATCAGAATTTCAGAATGGCTCAAGATTTCTTTAATGCTCATCTTACACCAATGCAGTCAGGGTGTTGCAAACCACCAACACAATGTGCATACACATTTGTGAACCCAACTTATTGGATTAGTCCAATAAACAATGCAGCAGATATGGATTGTCTTCAATGGAGCAACGACCAAACACAACTTTGTTACAATTGTGACTCATGCAAAGCTGGTTTGTTGGCAAATCTTAGAAAGGAATGGAAAAGAGCTAATGTGATTTTGATAATCACTGTTATTGTTTTAATTATCGTTTATTTAATCGGGTGTTTTGCTTTTAGGAATGCCAAAACTGAAGATCTCTTTCGCAAATACAAACAAGGCTATACTTAA 810 0.358 MAMSNNIIGFINLLAVIISIPIIGAGIWLTNEPADTCIKFLQWPVIILGVLLLIVSLAGLIGSFWRISCLLIFYLVAMLVLIILLVCLVVFVYMVTVRGHGMIEPNRAYLEYRLDDFSGFLKRRVRSSFKWDAIRSCLSETNMCAELNQNFRMAQDFFNAHLTPMQSGCCKPPTQCAYTFVNPTYWISPINNAADMDCLQWSNDQTQLCYNCDSCKAGLLANLRKEWKRANVILIITVIVLIIVYLIGCFAFRNAKTEDLFRKYKQGYT* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1490 269 Pfam Tetraspanin family 6 250 IPR018499 GO:0016021
Tpr2g1490 269 ProSitePatterns Transmembrane 4 family signature. 49 71 IPR018503 GO:0016021
Tpr2g1490 269 PANTHER TETRASPANIN-8-RELATED 1 268 IPR044991 GO:0009734|GO:0016021
Tpr2g1490 269 PANTHER TETRASPANIN/PERIPHERIN-RELATED 1 268 - -
Tpr2g1490 269 PRINTS Transmembrane four family signature 6 29 - -
Tpr2g1490 269 PRINTS Transmembrane four family signature 38 64 - -
Tpr2g1490 269 PRINTS Transmembrane four family signature 65 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1490 Tpr-Chr2 17549547 17551887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1490 1 269 Miscellaneous Gene Families AT5G46700 67.658 4.29e-130 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1490 - - gmx:100795775 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1490 2 17549547 17551887 Tpr2g1490 2 17549547 17551887 ECH
Tpr2g1490 2 17549547 17551887 Tpr4g4702 4 55438164 55439915 PCT