Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1476 ATGGTGGTGAAATGCTTACTCCGTAACAGACTTCACTTCCAACAACAACAACAACAACGTTTCTTCAGGTTCTATTCTCCAACTTCTTCCGCATTCATGATATTAGAACATGAAACTCCAAATTTCAATGACCCACTTCCCAAAACCCCATCAAAATTGTCTCTTTTAGTTGTTAGAGTCTTAAAGTCTTTAAATTGGAGGAATGCAAGGGAAATAAAGTTCAAGGGTTGGGTTCAAACTCATGGTTTTTCACATTCAATCAATTCCTTTAGAATAATGATTCATACTTTTGCTTTAGCTGGTATGCGTTTGGAAGTGTTTGCATTGCTTAGAGATATTGTTGGATACTATAAAGAGGAAAATCGTGACGCGTTCGAATTGTTTTCGGCTTTGCTTGATTCGCCAGACCATGTTGAAAGGTCTGTTGTTGTGTTTGATATGCTTATGAAAGTTTTTGCTTCGAATGCTATGCTTGAACATGCTTATTATGTGTTTGTTAGTGCTAAGGATGTTGGGATTGAACTGAATATAATGTGTTGCAATTTCTTGTTGAAATGTTTGATAGAAGCAAATAGAGTGGATGGTGTGAGATGTTTGTTTGAGGATTTGAAAAACTTTGGTCCTACGCCGAATATCCACACTTATACTATGATGCTGAACTTTTATTGTAGAGATGTTGGGTGCAGTGTTGATATTAGACGGGCTTCTGAGATTTTAGCGAAGATATATAGGAGTGGGGAAACCCCGAATGTTGTCACGTATAGTACTTATATTAAGGGACTTTGTAAAGTTGGTTCCTTTGAGATTGTTTGGAAGTTAGTTTGTAACTTGCACCGTAAAAATCAGCCTCTCAATAGCCATTGTTTTAATGCTGTCATATATGGACTTTGTCAAAGAGGTTCCGTAGATGAAGCTTCAGAAGTTTTGGAAGAAATGAAAAACTTTGGAGTAGTGCCTGATTTTTATAGTTATAGCATTTTAATTGATGGATTTTGTAGGGAAGGTGGTATGGATTCAGCCATCAAGATTTTGAAGGAGATGAGTAGCAATAATATTGCTCCTTCTGCTTTTAGTTGTTGCAGTCTAATTAGGGAATTCTACAAATTGAGACGATTCACTGAAGCATTGGAAGTTTTTAGTATCATGCAAAAACATGGTATATGGCCAGATACAATCGCTTGCAACCATATTCTTAGTATTTACTGTAGGGGAAGCGACTTCAATGAAGCCTTGGTATTGTCGGAGGAATTCCAACAACACGGAGTTAACCTCAACCCATATTCATATAATGAATTCATCCACAAGATTTGCAGAGAGAGTTTGCCAAAAAAGGCACTGCAGCTTCTGCCAATGATGCTTAAAAGGAATGTACTTCCGGGAGTTGTTAATTATAGTACTCTTATATCTGGCATTGCCAAACAGTCAAATCCTAAAAAAGCTGTGATGTTATTCACAAGAATGACAAAAGTAGGAATCACTTTCAACGTCAAAACGTATACAATTCTTATTGACCTATGTACCCGTTATTGCGGAATTCTTAAATCATATTACTTATTTGAGGAAATGCAAGAAAGGGGTGTATATCCAGATCAGATCGCGTATACAACTCTAATCACTGCCTTTTGTAATACCGGAGAAATGGTTAAGGCACGGGCATTATTTGATGAAATGTTGCGGGAAGGATGTTCACCAAATGTAATTACTTATACTTGTATGATTAGTGGATATTGGAAGTTAAACATGATGGAGCAGGTTATGAGGTTGTATAATGAAATGAAAGAAAAGGGTGTATATCCAGATCAGATCGCATATACATCTCTAATAGCTGCCTTCTGTAGTACTGGAGAAATGATTTTGGCGCAGGCATTATTTGATGAAATGTTACGGGAAGGCTATTCACCAAATGTAATTCTTTATACTTGTATGATTAATGGATATTGGAAGTTAAACATGACAGACCAGGCTAAGAAGTTGTATGACGAAATGAAAAAAAATGCTGTATATTTAGATCGGATCGCATATACAACTGTAATAGCTGCCTTTTGTAATACCGGGGACATGATTATGGCGCGGACATTATTTGATGAAATGTTGCGGAAAGGCTATTCACCAAATGTAAGTACTTATACTCGTATGATTAATGGATATCGGAAGTTAAACATGATAGACCAGGCTCAGAAGGCTGCAACTGGTTTGTCTCGTAAGGTTCCGTGTCTGAAATCTGGTGCCATTAGGTAG 2238 0.3695 MVVKCLLRNRLHFQQQQQQRFFRFYSPTSSAFMILEHETPNFNDPLPKTPSKLSLLVVRVLKSLNWRNAREIKFKGWVQTHGFSHSINSFRIMIHTFALAGMRLEVFALLRDIVGYYKEENRDAFELFSALLDSPDHVERSVVVFDMLMKVFASNAMLEHAYYVFVSAKDVGIELNIMCCNFLLKCLIEANRVDGVRCLFEDLKNFGPTPNIHTYTMMLNFYCRDVGCSVDIRRASEILAKIYRSGETPNVVTYSTYIKGLCKVGSFEIVWKLVCNLHRKNQPLNSHCFNAVIYGLCQRGSVDEASEVLEEMKNFGVVPDFYSYSILIDGFCREGGMDSAIKILKEMSSNNIAPSAFSCCSLIREFYKLRRFTEALEVFSIMQKHGIWPDTIACNHILSIYCRGSDFNEALVLSEEFQQHGVNLNPYSYNEFIHKICRESLPKKALQLLPMMLKRNVLPGVVNYSTLISGIAKQSNPKKAVMLFTRMTKVGITFNVKTYTILIDLCTRYCGILKSYYLFEEMQERGVYPDQIAYTTLITAFCNTGEMVKARALFDEMLREGCSPNVITYTCMISGYWKLNMMEQVMRLYNEMKEKGVYPDQIAYTSLIAAFCSTGEMILAQALFDEMLREGYSPNVILYTCMINGYWKLNMTDQAKKLYDEMKKNAVYLDRIAYTTVIAAFCNTGDMIMARTLFDEMLRKGYSPNVSTYTRMINGYRKLNMIDQAQKAATGLSRKVPCLKSGAIR* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1476 745 PANTHER (PPR) REPEAT PROTEIN, PUTATIVE-RELATED 664 730 - -
Tpr2g1476 745 PANTHER (PPR) REPEAT PROTEIN, PUTATIVE-RELATED 326 597 - -
Tpr2g1476 745 PANTHER (PPR) REPEAT PROTEIN, PUTATIVE-RELATED 587 669 - -
Tpr2g1476 745 PANTHER (PPR) REPEAT PROTEIN, PUTATIVE-RELATED 2 335 - -
Tpr2g1476 745 TIGRFAM PPR: pentatricopeptide repeat domain 533 566 IPR002885 -
Tpr2g1476 745 TIGRFAM PPR: pentatricopeptide repeat domain 498 530 IPR002885 -
Tpr2g1476 745 TIGRFAM PPR: pentatricopeptide repeat domain 567 600 IPR002885 -
Tpr2g1476 745 TIGRFAM PPR: pentatricopeptide repeat domain 464 495 IPR002885 -
Tpr2g1476 745 TIGRFAM PPR: pentatricopeptide repeat domain 288 320 IPR002885 -
Tpr2g1476 745 TIGRFAM PPR: pentatricopeptide repeat domain 358 390 IPR002885 -
Tpr2g1476 745 TIGRFAM PPR: pentatricopeptide repeat domain 322 355 IPR002885 -
Tpr2g1476 745 TIGRFAM PPR: pentatricopeptide repeat domain 638 668 IPR002885 -
Tpr2g1476 745 TIGRFAM PPR: pentatricopeptide repeat domain 603 636 IPR002885 -
Tpr2g1476 745 TIGRFAM PPR: pentatricopeptide repeat domain 673 706 IPR002885 -
Tpr2g1476 745 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 320 354 IPR002885 -
Tpr2g1476 745 Pfam PPR repeat family 671 716 IPR002885 -
Tpr2g1476 745 Pfam PPR repeat family 176 224 IPR002885 -
Tpr2g1476 745 Pfam PPR repeat family 564 613 IPR002885 -
Tpr2g1476 745 Pfam PPR repeat family 285 333 IPR002885 -
Tpr2g1476 745 Pfam PPR repeat family 389 438 IPR002885 -
Tpr2g1476 745 Pfam PPR repeat family 459 506 IPR002885 -
Tpr2g1476 745 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 600 634 IPR002885 -
Tpr2g1476 745 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 355 389 IPR002885 -
Tpr2g1476 745 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 250 284 IPR002885 -
Tpr2g1476 745 Gene3D Tetratricopeptide repeat domain 52 227 IPR011990 GO:0005515
Tpr2g1476 745 Gene3D Tetratricopeptide repeat domain 513 619 IPR011990 GO:0005515
Tpr2g1476 745 Gene3D Tetratricopeptide repeat domain 620 745 IPR011990 GO:0005515
Tpr2g1476 745 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 670 704 IPR002885 -
Tpr2g1476 745 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 285 319 IPR002885 -
Tpr2g1476 745 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 565 599 IPR002885 -
Tpr2g1476 745 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 664 730 - -
Tpr2g1476 745 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 326 597 - -
Tpr2g1476 745 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 587 669 - -
Tpr2g1476 745 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2 335 - -
Tpr2g1476 745 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 635 669 IPR002885 -
Tpr2g1476 745 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 425 459 IPR002885 -
Tpr2g1476 745 Gene3D Tetratricopeptide repeat domain 228 335 IPR011990 GO:0005515
Tpr2g1476 745 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 530 564 IPR002885 -
Tpr2g1476 745 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 390 424 IPR002885 -
Tpr2g1476 745 Pfam PPR repeat 358 387 IPR002885 -
Tpr2g1476 745 Pfam PPR repeat 252 280 IPR002885 -
Tpr2g1476 745 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 460 494 IPR002885 -
Tpr2g1476 745 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 495 529 IPR002885 -
Tpr2g1476 745 Pfam PPR repeat 525 557 IPR002885 -
Tpr2g1476 745 Pfam PPR repeat 631 663 IPR002885 -
Tpr2g1476 745 Gene3D Tetratricopeptide repeat domain 337 512 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1476 Tpr-Chr2 17366954 17372855 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1476 280 735 Glycosyltransferase AT1G05670 26.186 9.46e-55 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1476 - - mtr:MTR_5g029690 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1476 2 17366954 17372855 Tpr2g1476 2 17366954 17372855 ECH