Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1462 ATGGAACCAAATTCCACAATAGCATTGGATGGAGCTGCACTCAATCTGAAGCGAAAGCGGGACACCCGATGTGTTGCACATCTGACTGGATCTTCGGCACCAACAAACTTGGTTATCAAACAAATGAGATTGGTTGGTAGTGAAGGCAAACCGGCCGACTTTGGTTCTGGTATTTCAAGGTCCTTGGTAAGATATTATTTGAACTATAAGAAAAGCGGAATGCCCAAACGTTTGATGTTCTATAAGAACGGTGAATGGTTTGACTATCCTAAGGATGTTGTTGACTTGGTTAAGAAAGATTTCGAAATAAAGAAGGCAGCTGTGGAAGTAGAGTTAGATGGCCAGGATGTTGTGCTAGATTTTTTGCATATGTATAGTGTGGACTTGAAAACGGGTTTGCAACAACCCATTGCTTGGATTGATGAGGTGGGGGGCTGCTTTTTCCCTGAAGTGTTTGCTGGTTTTGATGAAGAACCCAATAATTTAGGCGAGCAGGAGGGTGGAGAAAATCACGATGCCAATGAGCCACATGAAATAAAATTGCATTTGTCAATTGAAATAAATGGGGCGGATGAATCCAAGTTGGGGGAGTATAGTGGGGAGTCTAACGTTGTTGCCAAGGATGTAGAAGCTGACAGTCATGATAGCATGAACAAAATGGGCAGTAAAAATGTTGTTGCAGCTATAAGGCAAGATCAAGACGTAGACTTAGATGCTTATACTGAATCTGCATATGGAAAACTGGATGTGGATTCTGTACAGAAGATGTTTCTTACAGGAATGACTACTTTGGGCGTTACTAACGCTGACATAGTTGAGATTTACCGCAGCTCAGGCCTTTCAATGCAAGCGCGACTGGACTTATTTCAGAAGCAAGCTGAAATCACAAAAGGAGTTCATGGGGATGCTAATGTTCGATATGCATGGCTTGCTTGTTCTAAAGAGGAACTGTCTACAATGATGGAGTATGGGCTTGGTCACAAAGGACTATCTGCATCCAAATGCATATATGGCTTTGGTGTTCATCTTGCTGCTGTTAGCCACCCTTATGCCTGTGCACCTTATTTTGATGTTGATGAAAATGGGATTAAGCATTTGGTTCTTTGCCGTGTCATAATGGGGAACATGGAGCTTCTTCGTCCTGGCAGTGGTCAGCTTCGTCCAAGTGGTTGCGAATATGATAATGGAGTGGATGACATTCAGTGCCCAAAATACTATGTAGTTTGGAATATGAATATCAACACTCATATCTATCCAGAATTCGTTGTCAGCTTCAAGGCCCCTTTGGATGCTGAAGGAAATGGTTGTTCAACTGAGAGTAAGAAAAATGGTTCTGGGGATTCTACAGTGGACACTGGAAAAGCTGCCAGTGTGCCTGCTAACACCCGAAGAACTCCGAAATCCCCTTGGCTACCTTTTCGCATGCTTTTTGCTGCCATCAGAAACAGGGTTCCTCCCGATGCTATGTTTCTTATCAGAGCCCATTACGCACAGTTGACGTCAAAGAAGATTTCCCGTGCTGATTTTGTGATGAAGCTGAGGTTAATTGTTGGAGATGATCTACTGAGATCTGCAATAACTAACCTTCAAGTAAAGGGACCAGATGGTGAATTGAACGGCGCAAACATTAAGCAAGAGTGA 1641 0.4302 MEPNSTIALDGAALNLKRKRDTRCVAHLTGSSAPTNLVIKQMRLVGSEGKPADFGSGISRSLVRYYLNYKKSGMPKRLMFYKNGEWFDYPKDVVDLVKKDFEIKKAAVEVELDGQDVVLDFLHMYSVDLKTGLQQPIAWIDEVGGCFFPEVFAGFDEEPNNLGEQEGGENHDANEPHEIKLHLSIEINGADESKLGEYSGESNVVAKDVEADSHDSMNKMGSKNVVAAIRQDQDVDLDAYTESAYGKLDVDSVQKMFLTGMTTLGVTNADIVEIYRSSGLSMQARLDLFQKQAEITKGVHGDANVRYAWLACSKEELSTMMEYGLGHKGLSASKCIYGFGVHLAAVSHPYACAPYFDVDENGIKHLVLCRVIMGNMELLRPGSGQLRPSGCEYDNGVDDIQCPKYYVVWNMNINTHIYPEFVVSFKAPLDAEGNGCSTESKKNGSGDSTVDTGKAASVPANTRRTPKSPWLPFRMLFAAIRNRVPPDAMFLIRAHYAQLTSKKISRADFVMKLRLIVGDDLLRSAITNLQVKGPDGELNGANIKQE* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1462 546 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 5 532 IPR044964 -
Tpr2g1462 546 MobiDBLite consensus disorder prediction 436 463 - -
Tpr2g1462 546 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO1-RELATED 5 532 - -
Tpr2g1462 546 Gene3D - 245 427 - -
Tpr2g1462 546 Pfam RCD1-SRO-TAF4 (RST) plant domain 466 530 IPR022003 -
Tpr2g1462 546 SUPERFAMILY ADP-ribosylation 252 429 - -
Tpr2g1462 546 ProSiteProfiles PARP catalytic domain profile. 227 446 IPR012317 GO:0003950
Tpr2g1462 546 ProSiteProfiles WWE domain profile. 53 139 IPR004170 -
Tpr2g1462 546 ProSiteProfiles RST domain profile. 464 535 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1462 Tpr-Chr2 17263885 17269748 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1462 - - mtr:MTR_7g011550 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1462 2 17263885 17269748 Tpr2g1462 2 17263885 17269748 ECH