Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1447 ATGAGTTCTAAACCACACTTAAAACAAGGGTTATCTATGGTTAAGAGGATTCATCAATTGAGCAGTGATATGGATCAAGAATCTGAGAATGGGAGAGGAAGTGTTGATCAAGCTACTTACACGGTGCAAGTTCCTTCAACACCTGATAACCAACCTATTTCTCTTCAGAGGTCAACTTCTAGGAGAGTGGAGGATCAATACGCGTCGAGTTCTATGTTTACAGGTGGATTTAATCAGGTTACGCGCGCCCAATTGAAGGGTAGGGTGATTGAATCTGAATCCAGCCATCCGCAGATGGCTGGGAGTAAAGGGTCGGCGTGTGGGATGCCGGGGTGTGATGGAAAGGTCATGACTGATGAAAGAGGGTTGGAAATACTTCCTTGTGAGTGTGATTTTAAGATTTGTCGGGATTGTTATAGAGATAGTATGCGGAACGGTGAAGGGATTTGTCCTGGATGCAGGGAGGCTTATAAGGAGCAAGAAACTGATGAGGCTGCTGCTGTGCTTAATCAACAGTCACTACCTTTGCCTCCAGGTGCCGACGCGTTGAAGATGGAGAGGAGGTTGTCAATAATGAAATCGGGGAATTTGACGAGGAGTCATACTAATGAATTTGATCATTCTTGGTTGTTTGAGACTAAAGGGAGTTATGGATATGGAAATGCTATGTGGCCTAAAGATCCTGAGAATGGTGCTAGTTCTGGTTCAGGTTCTGATTGGATGGGTGGTGACCCTAATGTTTTCAAGGATAAGCCGTGGAAGCCGTTGACCCGGACAGTGAACATTCCTGCTGCAATTCTGACTCCTTATCGGCTTATAATATTAGTTCGGATGGTGGTGCTCATTTTCTTCCTTAAGTGGAGGGTAGAAAACCCCAACGAGGATGCAATGTGGCTGTGGGGGATGTCAGTAGTTTGTGAAATCTGGTTTGCATTTTCCTGGCTTCTTGACCAGCTTCCTAAGCTCTTTCCGATAAACCGTGTTGCTGATCTTGACGTTTTGAAAGAGAAGTTCGAAACTCCTAGTGAACACAACCAAACAGGAAGATCTGATCTTCCGGGAATTGATATGTTTGTGTCAACGGCAGATCCAGAAAAAGAACCGCCGCTTGTCACTGCAAATACTATTCTTTCGATTCTAGCTTGCAATTATCCGGTTGAAAAACTTTCATGTTATGTCTCTGACGATGGTGGCTCGCTTCTTACTTTCGAGGCCATGGCAGAGGCAGCAAGTTTTGCCGAATTGTGGGTTCCATTTTGTCGGAAGCACGATATTGAACCGAGGAACCCGGAATCTTATTTTAGTCTGAAGAGAGATCCCTACAAGAACAAAGTACGTTCTGACTTTGTAAGGGACCGTAGGAAGGTGAAGCGCGAGTACGAGGAATTCAAGGTTCGGATTAACGGCCTTCCTGATTCAATCCAGAGGCGCGCAGATGCTTATAATACTAGAGAGGAGATCAAAGCTATGAAGCAGTGGAGAGAGGCTGGAAGTGGAAACGATGTTGAACTGATGGAGAGTTTGAAAATTTCTAAAGCTACATGGATGGCTGATGGTACTCACTGGCCTGGGACTTGGACAACTCCTGCACCGGAGCATTCTCGGGGTGATCATTCCAGTATCATACAGGTAATGTTGAAACCTCCAAGTGATGAGCCACTGACCGGCGCAGAATCAGAGTCAAATGCAATGGATTTGACTGAAGTTGATATTCGCCTTCCTATGCTTGTCTATGTTTCTCGTGAAAAACGACCTGGCTATGATCACAACAAGAAAGCCGGGGCCATGAATGCCTTGGTTCGAGCTTCAGCTATTATGTCCAATGGAGCTTTCATACTTAATCTTGACTGTGACCATTACATATACAACTCCGAGGCAGTGAGGGAAGGCATGTGCTACATGATGGACCGCGATGGGGACAAAATCTGCTATGTTCAATTTCCTCAAAGGTTTGAAGGAATAGACCCTTCTGATCGCTATGCTAATCATAACACTGTCTTCTTTGACGTCAATATGCGAGCTCTCGATGGTATTCAGGGTCCTTTTTATGTCGGTACCGGATGTCTATTCCGAAGAACTGCACTTTATGGCTTTGATCCACCTCGGCTGCAAGAAGTGGTCACCGGTTGGTTTGGTAGTAAGAAAAAGAAATCCTCAACAGTTGCCTCAGTCCCTGAAGAAATTTCTCTAGAGAAACAATACTTGAATGGTAGCATCGATGATGAAGAAATGAGTACTGCTCTTATTCCTAAGAAATTTGGAGATTCGAGTCGTTTTGTTGATTCAATCAGAAAGGCAGAGTTCCAAGGTAGACCACTTGCAGATCACCCGTCTATAAAAAATGGACGTGATCCCGGTGGTCTAACAAGTCCTCGAGATCTCCTCAAAGCTTCTATTGTTGCTGATGCCATCAACGCCATCTCTTGTTGGTATGAAGACAAGACTGAATGGGGAGATAGGGTCGGATGGATTTACGGTTCTGTAACCGAGGATGTTGTGACTGGTTATAGAATGCACAATAGAGGATGGAAGTCTATATATTGTGTGACAAAGAGGGATGCCTTCCGGGGTACTGCTCCAATCAATCTTACCGACCGGCTTCACCAAGTTCTTCGATGGGCAACTGGCTCAGTCGAAATATTCTTTTCGCGCAACAACGCTCTTGTGGCCAATTCTAGATTGAAATTCTTGCAAAGGATTGGTTACCTTAATGTTGGAATCTATCCATTCACTTCATTCTTCCTTATTGTTTACTGCTTCCTCCCAGCTCTTTCGCTTTTCACCGGTCAGTTCATCGTCCAATCCCTCAAAGTCACTTTCTTAGTCTACCTCTTGGGAATCACAGTCACACTTATTCTTCTGGCTATTCTCGAGATCAAATGGTCCGGTATCGAACTCGAAGATTGGTGGAGGAACGAACAATTTTGGCTAATCGGAGGCACAAGTGCACATTTTGCCGCCGTTCTTCAAGGTCTACTTAAGGTATTAGCCGGCATTGAGATTTCTTTCACATTAACATCAAAATCATCTGGCGATGAAGAAAACGACGAATACGCCGATCTATACATAATCAAATGGAGCTCGTTGATGATTCCACCACTCACAATCATGATGGTTAATGTAATCGCAATTGCGGTTGCGGTTAGTAGGACTATATACAGCGATGATCGTCAATGGAGTAGTTTACTCGGAGGCGTATTCTTTAGCTTTTGGGTCTTGGCTCATTTATATCCATTTGCAAAAGGACTTATGGGAAGAAGAGGTAGAACACCAACTATAGTGTTTGTTTGGTCAGCTTTAATATCAATCACTATATCACTTCTATGGGTTGCTATTAATCCTCCTTCTGGTAATAATAATCAAATTGGAGGCTCATTCCAATTCCCTTGA 3390 0.4407 MSSKPHLKQGLSMVKRIHQLSSDMDQESENGRGSVDQATYTVQVPSTPDNQPISLQRSTSRRVEDQYASSSMFTGGFNQVTRAQLKGRVIESESSHPQMAGSKGSACGMPGCDGKVMTDERGLEILPCECDFKICRDCYRDSMRNGEGICPGCREAYKEQETDEAAAVLNQQSLPLPPGADALKMERRLSIMKSGNLTRSHTNEFDHSWLFETKGSYGYGNAMWPKDPENGASSGSGSDWMGGDPNVFKDKPWKPLTRTVNIPAAILTPYRLIILVRMVVLIFFLKWRVENPNEDAMWLWGMSVVCEIWFAFSWLLDQLPKLFPINRVADLDVLKEKFETPSEHNQTGRSDLPGIDMFVSTADPEKEPPLVTANTILSILACNYPVEKLSCYVSDDGGSLLTFEAMAEAASFAELWVPFCRKHDIEPRNPESYFSLKRDPYKNKVRSDFVRDRRKVKREYEEFKVRINGLPDSIQRRADAYNTREEIKAMKQWREAGSGNDVELMESLKISKATWMADGTHWPGTWTTPAPEHSRGDHSSIIQVMLKPPSDEPLTGAESESNAMDLTEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGAFILNLDCDHYIYNSEAVREGMCYMMDRDGDKICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGIQGPFYVGTGCLFRRTALYGFDPPRLQEVVTGWFGSKKKKSSTVASVPEEISLEKQYLNGSIDDEEMSTALIPKKFGDSSRFVDSIRKAEFQGRPLADHPSIKNGRDPGGLTSPRDLLKASIVADAINAISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWKSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALVANSRLKFLQRIGYLNVGIYPFTSFFLIVYCFLPALSLFTGQFIVQSLKVTFLVYLLGITVTLILLAILEIKWSGIELEDWWRNEQFWLIGGTSAHFAAVLQGLLKVLAGIEISFTLTSKSSGDEENDEYADLYIIKWSSLMIPPLTIMMVNVIAIAVAVSRTIYSDDRQWSSLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSALISITISLLWVAINPPSGNNNQIGGSFQFP* 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1447 1129 SUPERFAMILY Nucleotide-diphospho-sugar transferases 370 700 IPR029044 -
Tpr2g1447 1129 SUPERFAMILY RING/U-box 92 162 - -
Tpr2g1447 1129 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 48 1127 - -
Tpr2g1447 1129 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 48 1127 - -
Tpr2g1447 1129 Pfam RING/Ubox like zinc-binding domain 109 158 - -
Tpr2g1447 1129 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 172 IPR013083 -
Tpr2g1447 1129 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 551 709 IPR029044 -
Tpr2g1447 1129 Pfam Cellulose synthase 355 1119 IPR005150 GO:0016020|GO:0016760|GO:0030244
Tpr2g1447 1129 MobiDBLite consensus disorder prediction 26 61 - -
Tpr2g1447 1129 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1447 Tpr-Chr2 17039966 17045276 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1447 23 1129 Glycosyltransferase AT3G03050 72.801 0.0 1685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1447 K20924 - gmx:100813900 1840.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1447 2 17039966 17045276 Tpr2g1447 2 17039966 17045276 ECH