LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g1416	ATGGATCATAGTAGAGGAGATAGTTGGAGGGGTTTGGTGAATAATATGCTTCCTCCTGGTGCTTCTGTTCCTGATGATGTTACTAATTCTGATTATTCTATAGCTTTGGAATATTTAGGTCCGCCGGTTCCGTATGAAGTACCGAAAATCGAGCCGTTAGGTGTGAAATCAAGAGCAGTTGAACGAATCCCTTTGCCGATGTCTCGTATTACTGGTGTGACAGGCTCTCCTAATCATAGTCCGAGGGTGTCGGGAAGTTCAGAATCTGTGGTTTCTGTGTTACTAAACCCGGATCTTTCTTCTGGTTCGCCTTCTGCTTCGCCTGCTTCGGTTCATAACCCTTCAAATGTTGGTACTAAGCCGGTGATTAATGAAGCGAAGAGGGTGCCGGTTGTGACTTTTAATACGGTTGAAAGGTCTCAGATGAAAGAGTCGGTGGAAGTTGTGAAGCCGGTGTATCCGGAATACGTTGGAGTTGTGAAAGAAAAGAAGAAAAAGAAAATAAGAGTTTGTTATAGGTGTAGAAAAGGGAAGTGGGAAACTAAAGAGTCTTGCATAGTTTGTAATGCTAAGTATTGCAGTAACTGTGTGCTTAGGGCAATGGGATCGATGCCTGAAGGGCGTAAATGTGTAACATGCATTGGCCAGCCTATAGATGAAACAAAGCGTTTGAAATTGGGTAGATATTCGAGGGTGTTGTCCCGACTGTTGAGTCCTCTAGAAGTTAAGCAAATTATGAAAGCAGAGAAAGAATGTTCGGCTAATCAGCTTCAGCCGGAGCAGTTGAGTGTCAATGGATTGCCCCTAAAGCCTGACGAGATGGCAGAATTACTTGGATGCCCCTTACCTCCACGTAAGCTGAAGCCTGGTAGATATTGGTACGACAAAGAATCCGGTCTATGGGGAAAGGAAGGGGAAAAACCTGACAGAATCATTAGTTCAAACTTGAATTTCTCTGGCAAACTTAGCACTGATGCAAGTAATGGAAACACCGAGGTCTACATGAATGGTCGAGAGATTACAAAACTTGAACTGAGGGTACTCAGGTTGGCAAACGTGCAGTGTCCACGTGATACTCACTTTTGGGTTTACGATGATGGTCGTTACGAGGAGGAAGGTCAAAAGAATATACGAGGAAACATTTGGGAGAAGGCATCAACAAGATTTGTTTGTGCACTATTCTCTCTACCTTTTCCTCATGGACAGCCTCATGGTTCAAGAGACGAGACTAGTAATTATACTACAATTCCTAAATATCTGGAACAGAAAAAAACTCAGAAGCTTCTTCTTCTTGGAATTCAAGGATCTGGAACTAGCACTATGTTTAAGCAGGCCAAATTTTTATACGGGAACAAATTTACCGCTCAAGAGCTGGAGGACGTTAAGCTGATGATACAGAGTAACATGTATAAATATCTTAGCATTTTACTTGATGGAAGAGAGCGCTTTGAAGAGGAGGCTGTTTCTAGAATGAATGGACAAAGTTCTCCTGCTCAAATTACGGAAGCCGGTAGCAATGGTGAAGCTAGTAATACTAGTGAATGCGTCTATTCTCTCAACCCAAGGCTAAAACATTTTTCCGACTGGCTCTTGGACATTATAGCCACTGGAGATTTAGATGCATTCTTCCCTGCAGCGACACGTGAATATGCACCATTAGTTGAAGAAGTGTGGAAAGATCCAGCAATACAAGAAACCTTCAAAAGAAAAGACGAGCTTCACTTCCTTCCAGATGTTGCAGAGTACTTCTTGAGTCGGGCTGTTGAGATATCTAGCAATGAGTATGAACCTTCTGAAAGGGACATACTGTATGCAGAAGGAGTTACTCAAGGAAATGGTTTGGCTTTCATGGAATTCTCCCTCGATGATCGTTCTCCAAAGTTTGAAGCTTATACAGATAACCTTGATGCTCAGTTGCCACCTCAGACCAAGTACCAACTCATAAGGGTGAATGCCAAGGGCATGAGTGAAGGTTGCAAGTGGGTTGAAATGTTCGAAGATGTTAGAGCAGTCGTCTTTTGCGTTTCCCTAAGCGACTATGATCAGTTATATCTTGCACCAGACAGCAGCGGCAGCGGAACTCTTCTCCAAAACAAGATGATACAAAGCAAGGAGCTATTCGAAACAATGGTGAGACACCCTTGTTTCAAAGACACCCCTTTAATACTTGTTCTTAACAAATACGACATCTTTGAGGAAAAGATGAAAAGAGTATCCCTAAACGCATGTGAATGGTTCAACGATTTTTGTCCGGTACGAGCGCACGACAACTACCAGTCACTAGCACATCAAGCTTACTTCTATGTCGCGATGAAATTCAAAGACCTTTATGCATCCATCACAGGAAAGAAACTTTTCGTTGCGCAAGTAAGGGCAAGGGAAAGAATAACCGTTGATGAAGCGTTCAAGTACATAAAAGAGGTTCTTAAATGGGATGATGAGAAAGATGAAAATTACTATGGTCCACCTGAGGATTCCATTACAGACATGAGTTCCTCTTTTTATGTTAGACAAGAGGGGTAA	2523	0.4253	MDHSRGDSWRGLVNNMLPPGASVPDDVTNSDYSIALEYLGPPVPYEVPKIEPLGVKSRAVERIPLPMSRITGVTGSPNHSPRVSGSSESVVSVLLNPDLSSGSPSASPASVHNPSNVGTKPVINEAKRVPVVTFNTVERSQMKESVEVVKPVYPEYVGVVKEKKKKKIRVCYRCRKGKWETKESCIVCNAKYCSNCVLRAMGSMPEGRKCVTCIGQPIDETKRLKLGRYSRVLSRLLSPLEVKQIMKAEKECSANQLQPEQLSVNGLPLKPDEMAELLGCPLPPRKLKPGRYWYDKESGLWGKEGEKPDRIISSNLNFSGKLSTDASNGNTEVYMNGREITKLELRVLRLANVQCPRDTHFWVYDDGRYEEEGQKNIRGNIWEKASTRFVCALFSLPFPHGQPHGSRDETSNYTTIPKYLEQKKTQKLLLLGIQGSGTSTMFKQAKFLYGNKFTAQELEDVKLMIQSNMYKYLSILLDGRERFEEEAVSRMNGQSSPAQITEAGSNGEASNTSECVYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVEEVWKDPAIQETFKRKDELHFLPDVAEYFLSRAVEISSNEYEPSERDILYAEGVTQGNGLAFMEFSLDDRSPKFEAYTDNLDAQLPPQTKYQLIRVNAKGMSEGCKWVEMFEDVRAVVFCVSLSDYDQLYLAPDSSGSGTLLQNKMIQSKELFETMVRHPCFKDTPLILVLNKYDIFEEKMKRVSLNACEWFNDFCPVRAHDNYQSLAHQAYFYVAMKFKDLYASITGKKLFVAQVRARERITVDEAFKYIKEVLKWDDEKDENYYGPPEDSITDMSSSFYVRQEG*	841

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g1416	840	SUPERFAMILY	Transducin (alpha subunit), insertion domain	453	605	IPR011025	GO:0007165
	Tpr2g1416	840	Pfam	G-protein alpha subunit	422	808	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Tpr2g1416	840	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	423	812	IPR027417	-
	Tpr2g1416	840	SUPERFAMILY	FYVE/PHD zinc finger	155	214	IPR011011	-
	Tpr2g1416	840	SMART	galpha_1	410	790	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Tpr2g1416	840	MobiDBLite	consensus disorder prediction	102	122	-	-
	Tpr2g1416	840	PANTHER	EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 3	21	835	-	-
	Tpr2g1416	840	MobiDBLite	consensus disorder prediction	102	120	-	-
	Tpr2g1416	840	CDD	G-alpha	426	812	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Tpr2g1416	840	Gene3D	-	455	606	IPR011025	GO:0007165
	Tpr2g1416	840	ProSiteProfiles	G-alpha domain profile.	424	820	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Tpr2g1416	840	PANTHER	GTP-BINDING PROTEIN ALPHA SUBUNIT	21	835	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Tpr2g1416	840	PRINTS	Alpha G protein (transducin) signature	427	442	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Tpr2g1416	840	PRINTS	Alpha G protein (transducin) signature	595	617	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Tpr2g1416	840	PRINTS	Alpha G protein (transducin) signature	668	696	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Tpr2g1416	840	PRINTS	Alpha G protein (transducin) signature	721	730	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Tpr2g1416	840	Gene3D	-	622	818	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g1416	Tpr-Chr2	16538826	16545201	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g1416	-		-	gmx:100794534	1424.84

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr2g1416	2	16538826	16545201	Tpr2g1416	2	16538826	16545201	ECH