Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1403 ATGAATCGCCACCACGATCCCAATCCATTTGAAGAAGAAGAAGTCAATCCATTCTCGAATGGTGCTGGATCAAAATCGCGTGTTCCACCGTCGGCGTCTGAACCATTAGGCTTTGGTCAAAGACATGATGCTACTGTTGATATTCCTTTGGATACTTCCAATGGGGACTCCAAGAAAAAAGGTCAAGAGTTAGCAGTGTGGGAAGCGGATTTAAAAAGGAGAGAGAAGGAAATAAAAAGACGAGAAGATTCTGTTGCTAAAGCTGGTGTGCCCGTTGATGATAAGAATTGGCCTCCATTTTTTCCAATCATTCACCATGATATTGCCAATGAGATTCCAGTTCATGCTCAGAGGCTGCAATATTCGGCCTTTGCAAGTTGGTTGGGAATCGTTCTCTGCTTAGTTTTTAATGTAGTTGCTGTGACTGTCTGTTGGATCAGAGGCGGGGGTGTTAAAATATTTTTCCTTGCAGTGATTTATGCACTGCTTGGGGTTCCCCTTTCATACGTGCTTTGGTACAGGCCCCTCTATCGTGCTATGAGGACGGATAGTGCACTGAAGTTCAGTTGGTTTTTCATGTTCTACTTGCTTCATATAGTATTTTGCATCTTTGCTGCAATTGCGCCTCCAATTGTTTTTCATGGAAAGTCATTAACGGGCATCCTTGCGGCAATTGATGTGTTCTCAGACCACGTATTGGTTGGGATATTCTATTTGGTTGGATTTGGCCTGTTTTGCTTGGAGGCTCTTCTAAGCTTGTGGGTAATTCAGAAAATATACATGTTTTTCCGGGGGCACAAGTGA 804 0.4328 MNRHHDPNPFEEEEVNPFSNGAGSKSRVPPSASEPLGFGQRHDATVDIPLDTSNGDSKKKGQELAVWEADLKRREKEIKRREDSVAKAGVPVDDKNWPPFFPIIHHDIANEIPVHAQRLQYSAFASWLGIVLCLVFNVVAVTVCWIRGGGVKIFFLAVIYALLGVPLSYVLWYRPLYRAMRTDSALKFSWFFMFYLLHIVFCIFAAIAPPIVFHGKSLTGILAAIDVFSDHVLVGIFYLVGFGLFCLEALLSLWVIQKIYMFFRGHK* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1403 267 Pfam SCAMP family 95 265 IPR007273 GO:0015031|GO:0016021
Tpr2g1403 267 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 267 IPR007273 GO:0015031|GO:0016021
Tpr2g1403 267 MobiDBLite consensus disorder prediction 1 61 - -
Tpr2g1403 267 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 4 1 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1403 Tpr-Chr2 16395753 16402684 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1403 1 267 Miscellaneous Gene Families AT1G32050 75.093 9.38e-150 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1403 K19995 - gmx:100780723 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1403 2 16395753 16402684 Tpr2g1403 2 16395753 16402684 ECH