Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1390 ATGTCTCAAGAAATTTGCATACTACCATTTTTTGGACAAGGCCATCTTCTACCATGCTTCCAACTATGCAACCATTTAACTTCTTCCACAAACTTCAACGTTACCCTTCTCATCTCCTCAACTCACTCCACCTCTGTTCCCTCTTCTCTGCTTCAAAATCCTCTCTTTCATCTCACCCTAATCCCATCATCACCTCCTTCGCCCGAACACAGCCACGACGAGCTTGCTAAAGAGTTAAAAGATATCTTGTCTGAATACCATCGTCCGACAAGACCAGTTTGTGCAATTGTGGATGTTATGATGAGTTGGTCAAATGATGTTTTCAAAAAACTTGAAATTCCTACGGTGGCGTTTTTCACTTCTGGTGCATGCTCCGCCGCCATGGAGCTTGCAGAATGGAAAGCCCACCCGTTAGAATTGAGACCTGGTGAGATTCGGTTTGTTTCCGGATTACCTGGAGACATGGCGCTTACTTACTCTGACATGAAACGAAGACGTCACAAGCCTCCGCCACTCCATCACGGCTTTCCTCCGCCGCATCACGGCTTTCCTCCGCCTCCAGGTGGATTTGGGCCGGGAAAGATGGGGCCACCTAAACATGGAGATCAGCCACGGTGGCTTGATGAGGTAAGAGATACAATTGCGTTGATGATCAACACGTGTGATGATCTGGAGTGTCCATTTATTAACTACATCGCGAACCATGTTGGAAAACCAGTGTGGGGTGTTGGACCGCTTTTGCCTGAGCAATATTGGAAATCTTCCGGTTCAGTTATCCACGACCGTGATTTTCGGTCCAACCGACCATCCAATGTCACTGAGGAAGAAGTGGTCCAATGGTTAGATTCCAAGCCACGTGGATCGGTTTTATATGTGTCGTTCGGTACTGAAGTGGGTCCCACAACGGAGGAGTATATGGAGCTAGCTCAAGCATTGGAATCATGTGAGCAACCATTTATATGGGTGATTCAACCCGGATCGGGTACACCAGGTCCACCTCGTTTAGGAGGTGAACCCGGTTCAGGAAAATCAAAAACAGAAGAAGGGTATTTTCCACATGGATTGGATAAAAGAGTTGGGAATAGAGGTTTGATAATAAGTGGATGGGCGCCACAACTATTGATACTGAGTCACAAATCAACAGGTGGATTCTTGTCTCATTGTGGTTGGAATTCGACCGTGGAGGCTATTGGACATGGGGTTCCATTATTGGCTTGGCCTATAAGGGGTGACCAATACCATGATGCAAAATTGGTGGTGAGTCATCTTAGGGTGGGTTATATAGTCTCTGATGATCTATCAAAAAAGGTAACCAAGGATGATGTAATTGTGGGAATACAGAGGTTGATGGGTGATGAAGAAATTAAGAATAATGCTGAGGTTATTAGTGTTAAGTTTCGGAATGGGTTTCCAAGAAGTTCAATAGCTGCTTTAGATGCTTTTAAGGAATGTATCAATAAGAGATTTGTTTAG 1473 0.4508 MSQEICILPFFGQGHLLPCFQLCNHLTSSTNFNVTLLISSTHSTSVPSSLLQNPLFHLTLIPSSPPSPEHSHDELAKELKDILSEYHRPTRPVCAIVDVMMSWSNDVFKKLEIPTVAFFTSGACSAAMELAEWKAHPLELRPGEIRFVSGLPGDMALTYSDMKRRRHKPPPLHHGFPPPHHGFPPPPGGFGPGKMGPPKHGDQPRWLDEVRDTIALMINTCDDLECPFINYIANHVGKPVWGVGPLLPEQYWKSSGSVIHDRDFRSNRPSNVTEEEVVQWLDSKPRGSVLYVSFGTEVGPTTEEYMELAQALESCEQPFIWVIQPGSGTPGPPRLGGEPGSGKSKTEEGYFPHGLDKRVGNRGLIISGWAPQLLILSHKSTGGFLSHCGWNSTVEAIGHGVPLLAWPIRGDQYHDAKLVVSHLRVGYIVSDDLSKKVTKDDVIVGIQRLMGDEEIKNNAEVISVKFRNGFPRSSIAALDAFKECINKRFV* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1390 490 CDD GT1_Gtf-like 5 481 IPR002213 GO:0008194
Tpr2g1390 490 Gene3D Glycogen Phosphorylase B; 1 257 - -
Tpr2g1390 490 Gene3D Glycogen Phosphorylase B; 274 468 - -
Tpr2g1390 490 PANTHER GLYCOSYLTRANSFERASE 3 487 - -
Tpr2g1390 490 PANTHER EG:EG0003.4 PROTEIN-RELATED 3 487 - -
Tpr2g1390 490 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 484 - -
Tpr2g1390 490 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 276 463 IPR002213 GO:0008194
Tpr2g1390 490 ProSitePatterns UDP-glycosyltransferases signature. 369 412 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1390 Tpr-Chr2 16232692 16234731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1390 5 454 Glycosyltransferase AT2G15480 26.263 2.30e-53 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1390 - - jre:108980936 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1390 2 16232692 16234731 Tpr2g1390 2 16232692 16234731 ECH