Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1371 ATGGGTAAAGGTAATCCACAGAAATCAGGCCCCGGCGGCGACCTTCATACAGCTGCAAGGTCCGGTGATCTCATAGCCGTTCAGTCAATTTTGTTTTCAAATCCTTTGTCTGTTAATTCCAGAGATAAGCATTCCAGAACACCACTACATTTAGCAGCATTTTCTGGGCAAACAGAGGTAGTCAGTTACCTCTGCAAGAACAAGGCTGATGTTGGTGCTTCTGCTATCGATGACATGGCTGCGATACACTTTGCGGCACAGAAGGGACATTTAGAAGTTGTTAGGGCTCTGGTTTCAGCTGGTGCCTCTTTCAAATCCTCTACTCGTAAAGGAGTGACTCCATTACACTTTGCTGCTCAAGGTTCCCATTTGGAACTTGTCAAGTACTTGGCCAAGAAAGGGGCAAGTCTCACTATCAAGACAAAGGCGGGAAAGACCCCTTTGGATCTTGCTACCAATGATGAAGTCCGCACTTTTCTGGAGGGATTTAAAAAATCAGATAAGAATGAAGAGTCGAGAATCGACGATAAAGCCGAAGGATCTGATCCAAAAGAAAATGAAGAATCTGATCCAAAGGCATCATCCTCTTTGGGATCTGATGGTAATTTGAGTAGTGAGCCTCCTGCAGCTGCTGTTGATGAAGAAAAAAGTGAGAGAGAGAAGAGGAAGAGTACTGAAGATGATGCAAGAGAAGACTCATCACAACGGAAAAAGGCGAAAGTTAAGTTAAGCCATCTCCAAAGTTCAGATGATGCCCAAGAAGAAGAAAACCTGTAG 777 0.4427 MGKGNPQKSGPGGDLHTAARSGDLIAVQSILFSNPLSVNSRDKHSRTPLHLAAFSGQTEVVSYLCKNKADVGASAIDDMAAIHFAAQKGHLEVVRALVSAGASFKSSTRKGVTPLHFAAQGSHLELVKYLAKKGASLTIKTKAGKTPLDLATNDEVRTFLEGFKKSDKNEESRIDDKAEGSDPKENEESDPKASSSLGSDGNLSSEPPAAAVDEEKSEREKRKSTEDDAREDSSQRKKAKVKLSHLQSSDDAQEEENL* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1371 258 Gene3D - 12 183 IPR036770 -
Tpr2g1371 258 SUPERFAMILY Ankyrin repeat 15 153 IPR036770 -
Tpr2g1371 258 SMART ANK_2a 77 106 IPR002110 GO:0005515
Tpr2g1371 258 SMART ANK_2a 110 139 IPR002110 GO:0005515
Tpr2g1371 258 SMART ANK_2a 44 73 IPR002110 GO:0005515
Tpr2g1371 258 MobiDBLite consensus disorder prediction 162 258 - -
Tpr2g1371 258 ProSiteProfiles Ankyrin repeat region circular profile. 77 103 - -
Tpr2g1371 258 ProSiteProfiles Ankyrin repeat profile. 44 76 IPR002110 GO:0005515
Tpr2g1371 258 PRINTS Ankyrin repeat signature 45 60 IPR002110 GO:0005515
Tpr2g1371 258 PRINTS Ankyrin repeat signature 126 140 IPR002110 GO:0005515
Tpr2g1371 258 PANTHER ANKYRIN REPEAT PROTEIN 1 257 - -
Tpr2g1371 258 ProSiteProfiles Ankyrin repeat profile. 77 109 IPR002110 GO:0005515
Tpr2g1371 258 MobiDBLite consensus disorder prediction 211 252 - -
Tpr2g1371 258 PANTHER - 1 257 - -
Tpr2g1371 258 ProSiteProfiles Ankyrin repeat profile. 110 142 IPR002110 GO:0005515
Tpr2g1371 258 ProSiteProfiles Ankyrin repeat region circular profile. 110 142 - -
Tpr2g1371 258 MobiDBLite consensus disorder prediction 162 191 - -
Tpr2g1371 258 ProSiteProfiles Ankyrin repeat region circular profile. 44 71 - -
Tpr2g1371 258 Pfam Ankyrin repeats (3 copies) 77 140 IPR002110 GO:0005515
Tpr2g1371 258 Pfam Ankyrin repeats (3 copies) 15 73 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1371 15 153 Miscellaneous Gene Families AT1G05640 36.620 1.03e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1371 - - mtr:MTR_5g026800 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1371 2 15954526 15956637 Tpr2g1371 2 15954526 15956637 ECH