Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1352 ATGCTTGAGGAACGGCCAATTACGTTGAGACAAAGTCCTTCGAGAAGGAGATTGTTGAGGCCTGGTGTTGGTACTGATGATAGAGGTTGGACCTCACTTCATGTTTATTCACGGAAAGGTGATATCAAAGTGGTAAAAAAACTTCTCAACGAAGGAATGGATGTTAATGTGAGTGCATGGGGCCCTAAATCTAAAGGAGTGACCCCTCTCCACCTTGCCGCAGAAGGTGGTCACCTTGGAGTGATGGATGAACTGCTTGAGCGTGGTGCCAATATTGATGCCAGGACTAAGGGTGCTTGTGGCTGGACACCACTCCACATTGCAGCTAAAGAGAGAAATAGGGATGCTGTGAAATTCTTGGTAGAGAATGGAGCATTCTTGCCACCAGATATGAATGATAGCAGATTTAATCCGCCTCTTCATTACTGCCCAGGACTTGAATGGGCCTATGAGGAAATGAAACGACTTCGACGGGAAGAATTGTCTCCGGGGGAGACATCTTGCAGCTCAGAAAATTAA 519 0.4644 MLEERPITLRQSPSRRRLLRPGVGTDDRGWTSLHVYSRKGDIKVVKKLLNEGMDVNVSAWGPKSKGVTPLHLAAEGGHLGVMDELLERGANIDARTKGACGWTPLHIAAKERNRDAVKFLVENGAFLPPDMNDSRFNPPLHYCPGLEWAYEEMKRLRREELSPGETSCSSEN* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1352 172 Gene3D - 16 162 IPR036770 -
Tpr2g1352 172 Pfam Ankyrin repeat 29 57 IPR002110 GO:0005515
Tpr2g1352 172 ProSiteProfiles Ankyrin repeat profile. 28 60 IPR002110 GO:0005515
Tpr2g1352 172 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 6 171 - -
Tpr2g1352 172 SUPERFAMILY Ankyrin repeat 26 143 IPR036770 -
Tpr2g1352 172 ProSiteProfiles Ankyrin repeat region circular profile. 28 57 - -
Tpr2g1352 172 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Tpr2g1352 172 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
Tpr2g1352 172 ProSiteProfiles Ankyrin repeat region circular profile. 100 125 - -
Tpr2g1352 172 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 6 171 - -
Tpr2g1352 172 Pfam Ankyrin repeats (many copies) 68 121 IPR002110 GO:0005515
Tpr2g1352 172 ProSiteProfiles Ankyrin repeat profile. 100 125 IPR002110 GO:0005515
Tpr2g1352 172 SMART ANK_2a 65 94 IPR002110 GO:0005515
Tpr2g1352 172 SMART ANK_2a 28 57 IPR002110 GO:0005515
Tpr2g1352 172 SMART ANK_2a 100 133 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1352 32 155 Acyl Lipid Metabolism Gene Families AT5G53470 30.645 2.03e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1352 - - aprc:113868977 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1352 2 15791392 15794574 Tpr2g1352 2 15791392 15794574 ECH