Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1347 ATGTCTGTCCGGTGCAACTCTTCAAAAGACACTTTTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAAACACTGCACTTTTCACTTTCACACACTATCATCAATAACATCATTCCATTATTATACTCTTTCCTACCTTTCTCTTCTGTTTCAAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGAAACTTGTTCATCCTCATCTTCTCTTCCTTCAACTAATTCAAAACACAACAACCCATATTTTTTCTGATCATTTCCTTTCTCTACTCCAAAAGAGTTACTGTTTTTACTTTTTATCATATAATAATAATAATAAAAAAAAAGGAGAAAAAAAAATGGATGCTATAAGGAAACAAGCTAGCAGATTAAGAGAGCAAGTTGCCAAGCAACAACAGACTATACTTAGACAGTTGGGTCAACTTAGCAATGAACCACTCATGGCCGATGAATCTGAACTTGAATGTTATCATAAACTTCAAAAGTTATACACTTCTACAAAGACTGCTAAGCATTTTCAGCGGCATATTGTTCGTGGTATCGAAGGATTCATGTCTGTTAGTTCCAAGCAAATGGAGATAGTGAGGAAGTTGGCGAAGGATTGTTGCAAGTATGGGACTGAGAATGAAAAGCATGATAGTAATTACCCCCTTGCAAGTGCTTCTCTTCAATTCGGTAACTCATATGATATATTGGAAAATGAGAGGGAGACTTTGCTTGGGATCTTACGTGATCAGATCTCGGAACCACTGCGGGCACAAATAACAGGAGCTCCTTTGGAAGATGCACGCCACCTCACCCACAACTATGACAAACTTCGTCAAGAAGTAGAAGGCCAGGCTGCTGAAGTTTTGAGGCGTCGATCAAAGTTGAGGGATTCTTCTCTTTCGGCAGAGAGTTCAATGAGGCTTCAGAATGCAGAAAAAAGGTTGAAAGACCATAAATCTGCCTTGGTAGCACTTGGTAGAGAAGCAACTTCTGCTATGTCGTCAGTTGAAGAACAACAGCAACATATAACTCTCCAGAGCCTTTCTACAATGGTGTATGGTGAACGAACCTATCATCAGCATGCCCTTGTTATTCTAGAAAAACTATATGCTGAGATGATCATTATTGAGGAGAGACAATCAAAAGACTCTACATTTCCATTGCCAAAAGATGGACATAATCAACCTGCAGATGAGAAAGTTAGTTCAAATGGCATTGATGATAAACACAACACCCAAATGGGCACATACTTTTTCGCTAAGGTCATACATCCATTTGACGCTCAAGCTGAAGGGGAGTTAAATTTATCAGTTGACGATTATGTTGTAGTCCGTCAGGTTGCTGGAAATGGATGGTCTGAAGGAGAATACAATGGCAATGCTGGATGGTTTCCCTCTGCATATGTACAGAGACAGGACGTAGTACCAGCGAACAAGATACCAGAATAA 1449 0.3989 MSVRCNSSKDTFSSLSLSLSLSLSLSKTLHFSLSHTIINNIIPLLYSFLPFSSVSNLSLSLSLSLWKLVHPHLLFLQLIQNTTTHIFSDHFLSLLQKSYCFYFLSYNNNNKKKGEKKMDAIRKQASRLREQVAKQQQTILRQLGQLSNEPLMADESELECYHKLQKLYTSTKTAKHFQRHIVRGIEGFMSVSSKQMEIVRKLAKDCCKYGTENEKHDSNYPLASASLQFGNSYDILENERETLLGILRDQISEPLRAQITGAPLEDARHLTHNYDKLRQEVEGQAAEVLRRRSKLRDSSLSAESSMRLQNAEKRLKDHKSALVALGREATSAMSSVEEQQQHITLQSLSTMVYGERTYHQHALVILEKLYAEMIIIEERQSKDSTFPLPKDGHNQPADEKVSSNGIDDKHNTQMGTYFFAKVIHPFDAQAEGELNLSVDDYVVVRQVAGNGWSEGEYNGNAGWFPSAYVQRQDVVPANKIPE* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1347 482 SUPERFAMILY BAR/IMD domain-like 163 373 IPR027267 -
Tpr2g1347 482 PANTHER SH3 DOMAIN-CONTAINING PROTEIN 1 118 480 - -
Tpr2g1347 482 Coils Coil 267 287 - -
Tpr2g1347 482 Pfam Variant SH3 domain 422 470 IPR001452 GO:0005515
Tpr2g1347 482 SMART SH3_2 418 473 IPR001452 GO:0005515
Tpr2g1347 482 Gene3D SH3 Domains 402 480 - -
Tpr2g1347 482 Coils Coil 111 138 - -
Tpr2g1347 482 MobiDBLite consensus disorder prediction 385 404 - -
Tpr2g1347 482 ProSiteProfiles Src homology 3 (SH3) domain profile. 415 474 IPR001452 GO:0005515
Tpr2g1347 482 PANTHER SH3 DOMAIN-CONTAINING 118 480 - -
Tpr2g1347 482 Gene3D Arfaptin homology (AH) domain/BAR domain 159 384 IPR027267 -
Tpr2g1347 482 SUPERFAMILY SH3-domain 417 476 IPR036028 GO:0005515
Tpr2g1347 482 Coils Coil 308 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1347 Tpr-Chr2 15733270 15737510 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1347 - - mtr:MTR_5g026400 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1347 2 15733270 15737510 Tpr2g1347 2 15733270 15737510 ECH