Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1309 ATGTTTAGGATGAGGAAAGGACTCCCTTGTTGCAGCAAGGGAAGGAAAATTAGCATTGATTTTCTTCATGACCAAGAAAGAATTATGACATATAATGGCCTTGAAAGTTGCATTGTAAATAATCAATCATATGAAGAAGAAAGTAGAACAAGTAGAGGAGATGGATGCATAACTGATTCATTTGATGAAGATGATTCAAGTTGTTCTTCAAGTAAAGATGCTTTTGGATCATTCTCTTCAAAATGTTTAACAATGAAAAGGGATGATGAACAAGGTCTCGAAGAATGGGAACTCTCGGAAAGTCCTCAAAAAGTTTATGTCAAAGAAAAGCCTTCTTATGCTATTCAACATTCCGATATTGAAGACATGAAAGAAAAGTTTTCGAAGCTCTTACTTGGTGAAGATGTTACTGGAGGAACTAAGGGCATTAGTACAGCTTTGGCACTTTCTAATGCCATCACAAATTTATCAGTTACTGTTTTTGGTGAGCTGTGGAAATTGGAACCATTATCTGAAGAAAGGAAAAGTAAATGGCGAAGAGAAATGGATTGGTTACTGTCTCCGACTAACTATATGGTGGAGCTAGTTCCTGCTAAGCAAAACAACGGCAATGGTGGAATCTTTGAGATAATGACTCCAAAAGCTCGTGGAGACATTCACATGAATCTTCCAGCACTCCAGAAGTTGGACTCTATGCTTATCGAGGCACTTGATTCAATGGTGAAAACAGAGTTTTGGTATGGAGAGGGAGGAAGCCGAACTGAAGGGAGAGACACGAGTGTGCGGCATAGTAAAAGATGGTGGCTTCCATCACCTCAGGTACCAAAAACTGGTCTTTCTGATACCGAAAGAAAGAGGCTGGTTCATCAAGGAAGGGTGGTACGTCAAGTATTCAAGGCTGCTAAATCTATCAATGAAAATGTTTTGCTTGAAATGCCTGTGCCAGAAGTTATTAAAGATGCACTTGCAAAGTCTGGAAAGGCAAACCTCGGACAGGAACTGCACAAGGTATTGACAGCTGAATCAAATTGTGGTGAAGACATGCTTAAATCTCTCAATTTGAAATCCGAGCATACGGCCCTTGAGACTATTAATAAATTGGAATCTCTTATATTCTCATTGAAAGAGAGAACTATCGAACAAGTCTGCAGCAAATCACCAGTTAGAACCTCATGGTCTTTTGTGACGGGCTCTATATCAGAATTTGATAAAATGGAGTTATTATTGGATCGTGCGGAAACACTTTTACAGCTGCTTAAAATCAGATATCCTAATCTTCCTCAAACTTTTCTTGATGTTGCTAAAGTTCAATATGGCAAGGACATTGGACATTCCATTTTGGAAGCTTATTCAAGAGTTCTTGGAAATTTAGCATTCAGCATATTATCTAGAATAGGAGATATATTACAAGAGGATTGTCTAAGCAATTCTAATTCACTAAGTTCCTCTCCTGGAATAAATCTTTCTGAAACTTGGGTGGTGGATTCACATATTAGGCAATCCTTACTTCAAAAGATGGACAAAGCAGACGGACAATGTTGTGATAGTACTTCAAATTTAGAACTTGAATCTTTTGATGTCAAATCTAAGGAAGTAATAGCTACACCAAGTAGGAGTAATGTTTGGCGCATTAGTAAAGAGGCTTGTACAAGTGTGTCCACTCAAAATTCTCCATAG 1677 0.3816 MFRMRKGLPCCSKGRKISIDFLHDQERIMTYNGLESCIVNNQSYEEESRTSRGDGCITDSFDEDDSSCSSSKDAFGSFSSKCLTMKRDDEQGLEEWELSESPQKVYVKEKPSYAIQHSDIEDMKEKFSKLLLGEDVTGGTKGISTALALSNAITNLSVTVFGELWKLEPLSEERKSKWRREMDWLLSPTNYMVELVPAKQNNGNGGIFEIMTPKARGDIHMNLPALQKLDSMLIEALDSMVKTEFWYGEGGSRTEGRDTSVRHSKRWWLPSPQVPKTGLSDTERKRLVHQGRVVRQVFKAAKSINENVLLEMPVPEVIKDALAKSGKANLGQELHKVLTAESNCGEDMLKSLNLKSEHTALETINKLESLIFSLKERTIEQVCSKSPVRTSWSFVTGSISEFDKMELLLDRAETLLQLLKIRYPNLPQTFLDVAKVQYGKDIGHSILEAYSRVLGNLAFSILSRIGDILQEDCLSNSNSLSSSPGINLSETWVVDSHIRQSLLQKMDKADGQCCDSTSNLELESFDVKSKEVIATPSRSNVWRISKEACTSVSTQNSP* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1309 558 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 118 476 IPR005512 GO:0005085
Tpr2g1309 558 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 14 21 549 - -
Tpr2g1309 558 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 21 549 IPR038937 GO:0005085
Tpr2g1309 558 Gene3D PRONE domain, subdomain 1 112 349 - -
Tpr2g1309 558 Gene3D PRONE domain, subdomain 1 350 482 - -
Tpr2g1309 558 ProSiteProfiles PRONE domain profile. 110 482 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1309 Tpr-Chr2 15302840 15310559 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1309 - - gmx:100818685 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1309 2 15302840 15310559 Tpr2g1309 2 15302840 15310559 ECH