Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1261 ATGGCACCAGCTAGGGTTTTCGGAGCATTTGCCGGCAGAGCACTCATGGCGGCTGCGGCTAAGAGCGCGACAAAGAAAGTTGCTGCTGCTTCCGCCGAAGCTTCAACCAAAACCGCTGTGAAGAAAACGGTTAAGAGAACGGTCTCGGTCAAGAGTACCGGAGGTATACAGAAGGTTGTTCCGGTCACTTCTGAGCTCGGAAGTTTCATCGGTTCACCTGAAGTTTCTAGAACCGAAGCTGTTAAGAAAGTTTGGGAGTACATCAAGCTGCAGAATCTTCAGAATCCTAATAACAAGAAGGAGATCTTTTGTGATGACAAGCTGAAGACCATTTTCGATGGGAAAGAAAAAGTTGTTTTCACTGAGATTGCCAGATTGTTGGCTAACCATTTCGTGAAAACGACCTGA 408 0.4681 MAPARVFGAFAGRALMAAAAKSATKKVAAASAEASTKTAVKKTVKRTVSVKSTGGIQKVVPVTSELGSFIGSPEVSRTEAVKKVWEYIKLQNLQNPNNKKEIFCDDKLKTIFDGKEKVVFTEIARLLANHFVKTT* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1261 135 CDD SWIB-MDM2_like 60 131 - -
Tpr2g1261 135 Pfam SWIB/MDM2 domain 60 131 IPR003121 -
Tpr2g1261 135 Gene3D SWIB/MDM2 domain 49 135 IPR036885 -
Tpr2g1261 135 ProSiteProfiles SWIB/MDM2 domain profile. 55 133 IPR003121 -
Tpr2g1261 135 PANTHER PROTEIN TRI1 4 134 - -
Tpr2g1261 135 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 4 134 - -
Tpr2g1261 135 SMART swib_2 56 135 IPR019835 -
Tpr2g1261 135 SUPERFAMILY SWIB/MDM2 domain 50 133 IPR036885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1261 Tpr-Chr2 14718673 14720586 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Tpr2g1261 SWIB 6.6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1261 - - gmx:100779127 155.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1261 2 14718673 14720586 Tpr2g1261 2 14718673 14720586 ECH