Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1249 ATGGTCCCTAAACCCATCATAATAACAAGCAAACAACCACCTACAACTCCTATCCCTCCACTTAACATATCTTCCATCAAAACCAAAGAAAAACCCCAAATTTCACAAACTCAAACACTAAAAACTACCACCACAAAAACTCTTCCTACACCCCCCAAAACCACCAACACCACCACCACCCACAACCTCAAAACCACAACCAAAAAACAAGAACCATCATTTCCATCACTATTAATCAACACATTTGATGACATCATAAACAATTTCATAGACCCACCAATAAAACCATCAGTTGATCCAAGACATGTTTTGTCACAAAATTTCTCCCCGGTACTAAATGAACTCCCTCCAACACAATGCGAAATCATTAACGGCACTTTACCACCGTCACTTAACGGCGCTTACATAAGAAATGGCCCAAACCCACAATTCCTTCCACGTGGACCTTACCACCTCTTTGACGGTGACGGCATGCTTCACGCCGTTACAATCTCAAACGGAAAAGCCACACTCTGTAGCCGTTACGTTAAAACTTACAAATACAAAACCGAAAACGAAGCGGGTTACCCACTTTTCCCAAACGTGTTTTCCGGTTTCAATTCGCTTATTGCTTCTGCAGCACGTGGCTCTGTAACCGCCGCACGTGTCATAACCGGTCAGTATAATCTATCTAATGGCATTGGATTAGCAAACACCAGTTTAGCTCTGTTTGGTAACCGTCTTTTCGCTTTGGGAGAATCAGATCTTCCTTATGAAATTAAGTTAACGGAAAATGGTGATATTGAAACAGTTGGCCGTTATGATTTTGACGGTAAACTCTCCATGAGTATGACGGCACATCCAAAAATTGATGGTGAAACAGGTGAAACTTTTGCTTTCCGTTACGGTCCAATTCCGCCTTTTTTAACCTATTTCCGTTTTGATTCTAACGGAGTTAAACACAACGATGTTCCCGTTTTCTCCATGACAAGACCATCATTTCTTCATGATTTCGCCATTACTAAAAAATATGCTGTATTTGCCGATATACAGCTCGGGATGAATCCACTTGAAATGATTTCAGGTGGACCTCCGGTAGGTTCCGATCCTTCGAAAATTCCAAGGATCGGAATACTTCCTCGTTATGCTAACGATGAATCGAAGATAAAGTGGTTTGATGTGCCAGGGTTTAATATAGTTCACGCCATAAACGCGTGGGATGAAGAAGATGGAAAAACGATTACACTTATAGCACCGAATGTTCTCTCCATTGAGCATACAATGGAGAGATTGGAGCTTGTTCATGCAATGATCGAGAAAGTGAAGATTAACATTGAAACCGGGATTATATCAAGACAACCATTATCAGCTAGAAATCTTGATTTCGCAGTTTTAAACCCTAAATTTCAAGGGAAGAGAAGTAGGTTTGTTTACGCGGCCATTGGGAATCCAATGCCGAAGATTTCAGGAGTTGTTAAGATTGATGTGTTGAAAGGGGAGGAAGTTGGGTGTAGGATGTATGGAGAAGGTTGTTTTGGAGGTGAACCGTTTTTTGTGGCGAATGAGGATGGTGTTGAAGAGGATGATGGTTATTTGGTGAGTTATGTGCATGATGAGAAGAAGGGAGAGTCGAGGTTTATAGTGATGGATGCTAAGTCGCCGGAGTTGGAGATAGTGGCGGAGGTGAAGTTGCCAAGGAGGGTGCCGTATGGTTTTCATGGACTGTTTGTGAGTGAGAGTGACATGAGGAAGTTGTCGGTATCATAA 1746 0.4198 MVPKPIIITSKQPPTTPIPPLNISSIKTKEKPQISQTQTLKTTTTKTLPTPPKTTNTTTTHNLKTTTKKQEPSFPSLLINTFDDIINNFIDPPIKPSVDPRHVLSQNFSPVLNELPPTQCEIINGTLPPSLNGAYIRNGPNPQFLPRGPYHLFDGDGMLHAVTISNGKATLCSRYVKTYKYKTENEAGYPLFPNVFSGFNSLIASAARGSVTAARVITGQYNLSNGIGLANTSLALFGNRLFALGESDLPYEIKLTENGDIETVGRYDFDGKLSMSMTAHPKIDGETGETFAFRYGPIPPFLTYFRFDSNGVKHNDVPVFSMTRPSFLHDFAITKKYAVFADIQLGMNPLEMISGGPPVGSDPSKIPRIGILPRYANDESKIKWFDVPGFNIVHAINAWDEEDGKTITLIAPNVLSIEHTMERLELVHAMIEKVKINIETGIISRQPLSARNLDFAVLNPKFQGKRSRFVYAAIGNPMPKISGVVKIDVLKGEEVGCRMYGEGCFGGEPFFVANEDGVEEDDGYLVSYVHDEKKGESRFIVMDAKSPELEIVAEVKLPRRVPYGFHGLFVSESDMRKLSVS* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1249 581 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 4, CHLOROPLASTIC-RELATED 19 577 - -
Tpr2g1249 581 Pfam Retinal pigment epithelial membrane protein 108 571 IPR004294 GO:0016702
Tpr2g1249 581 PANTHER BETA-CAROTENE DIOXYGENASE 19 577 IPR004294 GO:0016702
Tpr2g1249 581 MobiDBLite consensus disorder prediction 1 20 - -
Tpr2g1249 581 MobiDBLite consensus disorder prediction 28 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1249 Tpr-Chr2 14613989 14618597 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1249 K09840 - gmx:100777875 865.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1249 2 14613989 14618597 Tpr2g1249 2 14613989 14618597 ECH