Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1241 ATGGAAGAGACAATAATTCCATTGGTTGATTTTGAAAAAATTTCAGAGGAATTGGAGTGCAAGAAACTAAGAGAAGCATGTGAAAAATGGGGTTGTTTTAGGATCATTAACCATTCTATTCCTTTGAATCTTATGGCTGAGATGAAAATGGTTGTTGAAGCTCTTCTTGACCTTCCTATGGAGATTAAGAAAAATAACAAAGATGTTATTGCTGGGAGTGGTTACATGGCACCAAGTGTTGTTAATCCTTTTTATGAAGCTTTAGGTCTTTATGACTTGGGTTCTTCACATGCTTTGCAAGAATTTTGCTCTCAATTGAATGTCACACCCCATCAGAGGGAAATAATGGAGGCATATGGCAAAGCAATTCATGATTTGGCAGTAAAAATAGGAGTGAAGATGGCTGAATCACTAGGCATAATGGATGCTGATTTTGAGGAATGGCCATGCCAATTTAGAATCAACAAATATAACTTCACTCCAGAAGCTGTAGGATCTCTTGGAGTTCAATTGCACACAGATTCAGGGTTCCTAACAATTCTTCAAGATGATGAAAATGTTGGTGGTCTTGAAGTGATGAACAATTCTGGCTCATTTGTTTCAGTCCCTCCATTTCATGGAACCCTCCTAGCCAATCTTGGAGATATTGCTCAAGTATGGAGCAACGGAAGGTTTTGCAATGTGAAGCACCGTGTACAATGCAACGAAGCTACTACACGGTTTTCAATTGCGACATTTATGTTAGGACCTCGAGAGGGAAATGTTGAGGCTCCAGCAGAGGCGGTGGACCATGATCACCCGCGTCTATATCAACCTTTTATTTATGATGATTATAGAAAGCTCAGAGTTTCCAAGAAAATGTCCACAGGTGAAGCGCTTGAGCTATTACGCTTGGCCTAA 900 0.3989 MEETIIPLVDFEKISEELECKKLREACEKWGCFRIINHSIPLNLMAEMKMVVEALLDLPMEIKKNNKDVIAGSGYMAPSVVNPFYEALGLYDLGSSHALQEFCSQLNVTPHQREIMEAYGKAIHDLAVKIGVKMAESLGIMDADFEEWPCQFRINKYNFTPEAVGSLGVQLHTDSGFLTILQDDENVGGLEVMNNSGSFVSVPPFHGTLLANLGDIAQVWSNGRFCNVKHRVQCNEATTRFSIATFMLGPREGNVEAPAEAVDHDHPRLYQPFIYDDYRKLRVSKKMSTGEALELLRLA* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1241 299 Pfam 2OG-Fe(II) oxygenase superfamily 151 247 IPR044861 -
Tpr2g1241 299 Gene3D - 5 295 IPR027443 -
Tpr2g1241 299 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 146 250 IPR005123 -
Tpr2g1241 299 Pfam non-haem dioxygenase in morphine synthesis N-terminal 6 77 IPR026992 -
Tpr2g1241 299 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 297 - -
Tpr2g1241 299 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 3 297 - -
Tpr2g1241 299 SUPERFAMILY Clavaminate synthase-like 6 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1241 Tpr-Chr2 14553075 14555499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1241 6 298 Glycosyltransferase AT5G59530 28.125 3.67e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1241 K23947 - gmx:100783059 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1241 2 14553075 14555499 Tpr2g1241 2 14553075 14555499 ECH