Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1211 ATGGCGACTATAAGGCCATTACCTGAGTCAGTTCGCAGTTCAATTCGTTCCGGCATTTCCTTGTTCGACTTCACAAGAATCGTTGAGGAACTTGTTTTCAATAGCCTCGACGCTCACGCTACAAAGGTATCAGTGTTTGTGAATATTGGGGGTTGCTACTTAAAAGTAGTTGATGATGGAGGTGGAATTACTCGAGATGGACTGGAATTGGTGGGAGAAAGATATGCAACATCAAAATTTCTTAATTTGGCTGACCTAAATACCACAAGTGAAAACTTTGGTTTTCGTGGTGAAGCTTTAGCTTCCATTTCCGAAGTCTCTTTGTTGGAAATAGTGACAAGAGCTTATGGAAGGCCAAATGGATATAAGAAAGTATTGAAGGGGTGTAAGTGTTTGTATCTTGGTATTGATGATGATAGAAAGGAAGTAGGCACAACAGTCATTGTCTGTGAAATATTTTACAACCAACCAGTTCGGAAGAAACACATTCAATCCAGCCCCAATAAGGTACTTCAATCAATCAAGAAATGTGTAATGCGGCTTGCACTTGTATGCCCAAATATTTCCTTCAAAGTTGTTGATATTGAAAGAGAGGATGAGCTTTTCTGCTCACATTCTGCTGCTTCTCCACTGTCACTTGTAACCACTGGCTTTGGGGTGGAGGTCACAAACTCTCTTCATGAATTAGAAGTTGAAAATGATATCATAAAGCTTACTGGATACATATCAGGTCCTTGCAATACCCTGGATATGAAGGCCTTACAGTATCTCTATATCAACTCACAATTCGTTTGCAAGGGTCCTATTCACAAGCTTTTAAATCAATTGGCTATTGGGTTTGAGCATCATAACTCGTGGAGTGCCGATAATGAATGCCAAAACAGAAAGAGAGGAAGATCTCAACCATGTCCGGCATATATATTGAATTTAAGGTGCCCTCGCTCTTTATATGTTTTGAGCTTTGAGCCATCAAAAACTTATGTTGAATTCAAGGATTGGTCTCCGATACTAAACTTCATCGAAAAAGTCATCAAACAGTTCTGGAAGGGAAGCATAGCTTGTGATTCCTCCAATAAAGCCACTTCTATGGTTCAAGAAGATCGACTGGAGAAAGTAGATTTAGATGTCAACAACATTTCAGCGGAAACAGATATATCAAAATTTGGAAACCAAAATCGTAAAGATTGTTTAAACCCCTTCTTTTCCACTTCAGACAAGCTAACTGAAGATGACAATCATCAATGCAACAGGGAGGATGTTAGAACCACTGTTGGTTACTTACATCAAAGGACTGAGATGTTCAAAGAGAAACAAAATAAGGGAGGGTTTCACTGTCGGACTGTTTATTCTGGCAATTTACTGGATGTTTCATTCGCCAAAAGCATGCCCACCACTATGAAAAAGAATAACAACTTTTTGACATATGATAAAGATTTACTGCAAGGAGGTTACTTTTTGGATGCTATGTGTCCTGCTGTAGAAAGTTTCTATGATAATATACCTTTTTATGCAACAAGTTCTTCACATGGAAGAAAATTAAATAAAGTAGATGCTAGTGTGATCTGTGAACCACTTGAAGGTGATTTTCTTTATGATTCCTATGGGTTTGGTTATGATGTAGAGATTGGTGGGAATTTTCAAAAGCCTTTTCTAAAGAGCTGCTCTAAACAAAAAGGAAGTTATAAGAAGACTTCGCTCATAAATGATGAACTTGAACTCCAAACTTATAGCTTTTGGAGCAAGCAAAATATAGGGGAGGATTGTTTCAGTGGTAGTAAGGATTTCTATACCCGTCCCCGCGTAGAAGTTTCAAAAAAATTAAAGATGTCTGAAGATTCTGATTTTCTCGCAAAGGCATGGCCTGAAGAAAATCGTCTCCCTCCAGATTCATGGTATTCAGCAACAGAAATAGGTTACTCTGGTTCTAATGATCGATTATCAAACTCTGAATGGGATCCTGTCTATCAAGATCCCTCATCTCGAGCTACTGCATTGGATGTTAATCATACCAATGATATTAATGATCTAAGAGAAGAATCTAGATGCTATAAAAGGATTCATCATACACCAATTTTTGATGAAGAAAATGAGATCAACTTCAATTACGATCTTGGAGGAGCATCTAGATACAGTACAAGGATCCATCGCACACATATTTTTGACGAGGCAGAAAACGGGAACAACTTCAGTTATGATATGTCAAGGAATGCTAACCGACATCCCTACACCTCAAGTTTTGCAAATAGTGGATATAGTTTTGATGGTGCTGTTGATTGTAATGAAATAATCAACAGATTGGTTAACGTGCCTGATTTCGGTGATACACATTTCACAGAAAGGTCGGATATTTTAAATGAGGAGCCAGACTGGCTATTTCCTGAGTCATGTGTTGGAAACTGTAAGAGACCCAACATTATCAAAGGCGAAAAGGATCGTTATAGCCATCCAACTTTGGATAAGACTCGTGTAAGATCTAAAAGAAGCTTCTCAGCCCCTCCATTTCATAGAAGTAAAAGGAGGTTTTTCTCTTTAAATCAGCCTCCCAAAATGGTAGCTAAAAGACCTACCGGTCAAGCATCCCACCATGCTTCCAATCTTCTAGAAGCTAGTGATTTTAAATACTCTCAACATCCTCCTGGTGCTCTTAACCCCAACAATGAAGATCTATTGGAAGATCTCAAAACGAATGTGAAACGGAGTTCGGAGGTTTTGGGGGCTACACAGGTTAATGACATTGCTGAGATTGATGGGTTTGAAATTTCCAGAGTTCAAAAGAATGACCCAGTCGGGGAATTGACATCTAGGGAAATGCAAGATTCCATAGATTATGGGGCCAAATGGAGGAGCTTCTCACCTAAACCTCCAAAGAATGATAAACCAATTGATATTCAAAGTCAAAACAATAATATACTTGACATCTCTTCTGGATTCTTGCATCTTGCTGGAAATTCACTAATACCTGAAACTATCAGTAAGAAATGCCTCGAGGATGCCAAAGTTCTCCATCAGGTGGATAAGAAATTCATTCCAATCGTGGCTGGCAGAACCCTTGCTGTAATTGATCAGCATGCTGGAGACGAAAGAATCAGACTGGAAGACTTACGTCAAAAGGTATTATCTGGAGAAGCAAAAGCAATAACCTATCTAGATGCTGAACAGGAGCTGGTGCTACCAGAGATTGGTTATCAACTACTTCATAGTTACAGTGAACAGATTAAAGATTGGGGATGGATCTGTAACATTCACACTCAAAATTCTGAAACCTTTAGAAGGAATTTGGATGTTCTCAACAGACAACAAATGACCATCACTCTTGTTGCAGTACCGTATATTTTAGGTGTCAATTTAAACGATGTTGATCTTTTAGAGTTTCTTCAGCAGCTAGCTGATACTGATGGATCATCAACAATGCCACCCTCCGTTGTACGACTCCTAAATTCGAAAGCATGCAGAGGTGCAATTATGTTTGGGGATTCCTTGCTACCATCAGAATGTTCCCTTCTAGTTGAAGAGCTAAGGCATACATCACTCTGTTTCCAGTGTGCTCATGGGAGACCAACCACTGTTCCTCTAGTCAACTTGGAGGCACTGCATAATCAAATTGCCAAGCTTGGACTGATGAATGAGAGCTCAAGTAACAAGTGGCATGGATTACAAAGACATAAAGTGTCTATTGAGCGTGCAGTACAGCGTTTAAGTTCTGGTACAACGAGTTGA 3717 0.3923 MATIRPLPESVRSSIRSGISLFDFTRIVEELVFNSLDAHATKVSVFVNIGGCYLKVVDDGGGITRDGLELVGERYATSKFLNLADLNTTSENFGFRGEALASISEVSLLEIVTRAYGRPNGYKKVLKGCKCLYLGIDDDRKEVGTTVIVCEIFYNQPVRKKHIQSSPNKVLQSIKKCVMRLALVCPNISFKVVDIEREDELFCSHSAASPLSLVTTGFGVEVTNSLHELEVENDIIKLTGYISGPCNTLDMKALQYLYINSQFVCKGPIHKLLNQLAIGFEHHNSWSADNECQNRKRGRSQPCPAYILNLRCPRSLYVLSFEPSKTYVEFKDWSPILNFIEKVIKQFWKGSIACDSSNKATSMVQEDRLEKVDLDVNNISAETDISKFGNQNRKDCLNPFFSTSDKLTEDDNHQCNREDVRTTVGYLHQRTEMFKEKQNKGGFHCRTVYSGNLLDVSFAKSMPTTMKKNNNFLTYDKDLLQGGYFLDAMCPAVESFYDNIPFYATSSSHGRKLNKVDASVICEPLEGDFLYDSYGFGYDVEIGGNFQKPFLKSCSKQKGSYKKTSLINDELELQTYSFWSKQNIGEDCFSGSKDFYTRPRVEVSKKLKMSEDSDFLAKAWPEENRLPPDSWYSATEIGYSGSNDRLSNSEWDPVYQDPSSRATALDVNHTNDINDLREESRCYKRIHHTPIFDEENEINFNYDLGGASRYSTRIHRTHIFDEAENGNNFSYDMSRNANRHPYTSSFANSGYSFDGAVDCNEIINRLVNVPDFGDTHFTERSDILNEEPDWLFPESCVGNCKRPNIIKGEKDRYSHPTLDKTRVRSKRSFSAPPFHRSKRRFFSLNQPPKMVAKRPTGQASHHASNLLEASDFKYSQHPPGALNPNNEDLLEDLKTNVKRSSEVLGATQVNDIAEIDGFEISRVQKNDPVGELTSREMQDSIDYGAKWRSFSPKPPKNDKPIDIQSQNNNILDISSGFLHLAGNSLIPETISKKCLEDAKVLHQVDKKFIPIVAGRTLAVIDQHAGDERIRLEDLRQKVLSGEAKAITYLDAEQELVLPEIGYQLLHSYSEQIKDWGWICNIHTQNSETFRRNLDVLNRQQMTITLVAVPYILGVNLNDVDLLEFLQQLADTDGSSTMPPSVVRLLNSKACRGAIMFGDSLLPSECSLLVEELRHTSLCFQCAHGRPTTVPLVNLEALHNQIAKLGLMNESSSNKWHGLQRHKVSIERAVQRLSSGTTS* 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1211 1238 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 1 1196 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Tpr2g1211 1238 Gene3D - 1003 1191 IPR042120 -
Tpr2g1211 1238 SUPERFAMILY Ribosomal protein S5 domain 2-like 219 348 IPR020568 -
Tpr2g1211 1238 SMART DNA_mis_repair_2 214 349 IPR013507 GO:0005524|GO:0006298|GO:0030983
Tpr2g1211 1238 Pfam MutL C terminal dimerisation domain 999 1160 IPR014790 GO:0005524|GO:0006298
Tpr2g1211 1238 Pfam DNA mismatch repair protein, C-terminal domain 218 347 IPR013507 GO:0005524|GO:0006298|GO:0030983
Tpr2g1211 1238 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 118 - -
Tpr2g1211 1238 SMART MutL_C_2 1000 1160 IPR014790 GO:0005524|GO:0006298
Tpr2g1211 1238 Gene3D - 214 352 IPR014721 -
Tpr2g1211 1238 Gene3D - 1044 1155 IPR042121 -
Tpr2g1211 1238 PANTHER DNA MISMATCH REPAIR PROTEIN MLH3-RELATED 1 1196 IPR028830 GO:0006298
Tpr2g1211 1238 Gene3D - 2 207 IPR036890 -
Tpr2g1211 1238 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 23 201 IPR036890 -
Tpr2g1211 1238 SUPERFAMILY DNA mismatch repair protein MutL 998 1191 IPR037198 -
Tpr2g1211 1238 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 IPR014762 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1211 K08739 - gmx:100788019 1644.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1211 2 14186612 14196398 Tpr2g1211 2 14186612 14196398 ECH