LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g1203	ATGACCGCAGCCGAAGAATTATCATCGTATCCTCCAATTGATCCAGTCAACTTCGATCTCATCATTGTCGGAACCGGCCTTTCGGAATCTATCATCGCCGCTGCCGCATCGGCCGTTGGTAAAACCATCCTCCACCTTGACCCTAACTCCTTCTACGGAAGCCATTTCGCTTCTCTCTCCCTCGAAGATTTCACCTCTTACTTGAATTCCTCTCCCAAATCCATCACCGCCGAAAAACCATCAACAACCGATTCCGATTACACCTTCGTAAACCTCATTCAAAAACCTCTATTCTCCGATGCGGAGTTCATTTCGTGTGATTCCGTTGAGGATTCAACGTTCCTTCGTGAAAATTCGAGAAAATTCAATCTCGATTTGGGAGGACCTAGAGCATTATTCAGCGCAGACAAAACAATTGATCTGTTGTTGAAATCAGGTGCTGCACAGTACTTGGAATTCAAAGGCATCGATGCCAGTTTCGTCTATAATGCGAATGAGGGTTTGATGAATGTGCCAGATTCTCGTGGAGCGATTTTTAGAGACAAGAATCTTTCTCTTAAGGAGAAAAATCAATTGATGAAGTTTTTCAAACTTGTTCAGCAACATTTGGGTGGTAATGAGGATGAGAAGATTTCAGAGGAAGATTTGGAGAGTTCTTTTGTTAGTTTTTTGGAGAAAATCGGGTTGCCGCCGAAGATAAAATCGATTCTTTTGTATGCTATAGCCATGGTAGATTTTGATCAAGAAAATGGCGAGGTTTGTAAAGACTTACTTAAAACAAAAGATGGAATAGACCGTTTAGCTCAATACAGCTCATCTGTTGGAAGGTTTCCCAATGCACCGGGGGCTTTGCTTTATCCTATTTATGGTGAAGGAGAACTACCACAAGCCTTTTGTCGTCGTGCTGCTGTCAAAGGTTGCATTTATGTTCTCCGAATGCCGGTTATTTTTCTGCTTACGGATAAGGTGACTGGGTCGTATAAAGGTGTTAGATTAGCTTCAGGTCAGGATTTATACAGTCATCAGCTAATCCTGGACCCATCCTTCACGATTCCATCAACACCATCTTCGTCTCCTAATGATTCTTCCAGTGAAAGTTTCCAGATATTGAGTCAGAGAGATATTAAAGGAATGGTGGCTAGGGGAATATGCATCACAAGGAATTCCATAAAGCCAGATGTATCAAATTGCTCTGTGGTGTATTCTCCTAGATCTCTATATCCTGACCAGGTTACATCAGTCAGAGCTCTTCAGATAGGAGCAAATCTCGCTGTTTGTCCTGTGGGCACCTTTGTTTTATATTTTTCCACTTTGTGCAATGATGCCGATGAAGGAAAGAAGTTACTAAAAGCATCAATGAATGCTCTTCTTACACTGCCTGGTGTTCAAAGTGACAGTGAAGATAGAAAACCTATTGTGCTTTGGAGTGCATTTTATATTCAAAAGTTAACTATGAGTAAATTTGAAGCTATCAGTTCCACTCCTACACCAGACGGAAATCTAAACTACAATGACCTTTTAGACGCAACTGAGAAGCTATTTGGTCAAATGTACCCCAATGAAGAATTCTTCCCAAAGACGACATCCCCTGAAGATACTACAGATGATGATGAAAATGGGATAATTATGGAGAACGGATCATGA	1644	0.4142	MTAAEELSSYPPIDPVNFDLIIVGTGLSESIIAAAASAVGKTILHLDPNSFYGSHFASLSLEDFTSYLNSSPKSITAEKPSTTDSDYTFVNLIQKPLFSDAEFISCDSVEDSTFLRENSRKFNLDLGGPRALFSADKTIDLLLKSGAAQYLEFKGIDASFVYNANEGLMNVPDSRGAIFRDKNLSLKEKNQLMKFFKLVQQHLGGNEDEKISEEDLESSFVSFLEKIGLPPKIKSILLYAIAMVDFDQENGEVCKDLLKTKDGIDRLAQYSSSVGRFPNAPGALLYPIYGEGELPQAFCRRAAVKGCIYVLRMPVIFLLTDKVTGSYKGVRLASGQDLYSHQLILDPSFTIPSTPSSSPNDSSSESFQILSQRDIKGMVARGICITRNSIKPDVSNCSVVYSPRSLYPDQVTSVRALQIGANLAVCPVGTFVLYFSTLCNDADEGKKLLKASMNALLTLPGVQSDSEDRKPIVLWSAFYIQKLTMSKFEAISSTPTPDGNLNYNDLLDATEKLFGQMYPNEEFFPKTTSPEDTTDDDENGIIMENGS*	548

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g1203	547	SUPERFAMILY	FAD-linked reductases, C-terminal domain	376	481	-	-
	Tpr2g1203	547	Gene3D	-	15	523	IPR036188	-
	Tpr2g1203	547	PRINTS	Rab GDI/REP protein family signature	19	37	IPR018203	GO:0005092\|GO:0007264
	Tpr2g1203	547	PRINTS	Rab GDI/REP protein family signature	37	54	IPR018203	GO:0005092\|GO:0007264
	Tpr2g1203	547	PRINTS	Rab GDI/REP protein family signature	138	154	IPR018203	GO:0005092\|GO:0007264
	Tpr2g1203	547	PRINTS	Rab GDI/REP protein family signature	188	203	IPR018203	GO:0005092\|GO:0007264
	Tpr2g1203	547	PRINTS	Rab GDI/REP protein family signature	290	311	IPR018203	GO:0005092\|GO:0007264
	Tpr2g1203	547	Gene3D	Guanine Nucleotide Dissociation Inhibitor, domain 1	171	283	-	-
	Tpr2g1203	547	SUPERFAMILY	FAD/NAD(P)-binding domain	16	346	IPR036188	-
	Tpr2g1203	547	PIRSF	Rab_ger_ger_transf_A_euk	78	547	IPR001738	GO:0005968\|GO:0006886\|GO:0018344
	Tpr2g1203	547	PIRSF	Rab_ger_ger_transf_A_euk	4	95	IPR001738	GO:0005968\|GO:0006886\|GO:0018344
	Tpr2g1203	547	Pfam	GDP dissociation inhibitor	118	351	IPR018203	GO:0005092\|GO:0007264
	Tpr2g1203	547	Pfam	GDP dissociation inhibitor	17	103	IPR018203	GO:0005092\|GO:0007264
	Tpr2g1203	547	Gene3D	Guanine Nucleotide Dissociation Inhibitor, domain 2	96	483	-	-
	Tpr2g1203	547	PANTHER	RAB GDP-DISSOCIATION INHIBITOR	14	532	IPR018203	GO:0005092\|GO:0007264
	Tpr2g1203	547	MobiDBLite	consensus disorder prediction	524	547	-	-
	Tpr2g1203	547	PANTHER	RAB PROTEINS GERANYLGERANYLTRANSFERASE COMPONENT A	14	532	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g1203	Tpr-Chr2	14119166	14124866	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g1203	K23460		-	gmx:100795946	822.002

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr2g1203	2	14119166	14124866	Tpr2g1203	2	14119166	14124866	ECH