Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1135 ATGATGTTAGACGGAACCGAAGACGAAGAGAAGTTCCTCGCCGCCGGAATCGCCGGCCTTCAACAGAATTCATTCTACATGCACCGTGCATTGGACTCGAATAATCTTAGAGATGCTTTGAAATATTCGGCTCAGATGCTTTCTGAGCTTAGGACTTCCAAGCTTTCTCCTCATAAATACTACGAACTCTACATGCGTGCCTTTGATCAATTGAGGAAGCTGGAGATGTTCTTTGAGGAAGAGACTCGTCGCGGTTGCTCTATTATTGATCTTTATGAGCTTGTTCAGCATGCCGGCAACATTTTGCCTCGATTGTATCTCCTCTGTACAGTAGGATCTGTATACATCAAATCAAAGGAAGCTCCTGCTAAGGATGTTCTTAAGGATCTTGTGGAGATGTGTCGTGGCATTCAGAACCCTGTTCGTGGACTCTTTCTCAGAAGTTACCTTTCTCAAGTTAGTAAGGATAAATTGCCTGATATTGGTTCCGAGTACGAAGGGGATGCGGATACTGTATCAGATGCTGTAGAATTTGTACTCCAAAATTTCACAGAAATGAACAAACTTTGGGTGCGGATGCAACATCAGGGGCCGTCCCGGGAGAAGGAGAAACGGGAAAAGGAAAGGAGTGAGCTGCGAGATCTTGTTGGGAAGAATCTTCATGTTCTCAGTCAGATAGAGGGTGTTGACCTTGATATGTACAAAGATGTTGTGCTACCTAGAGTACTGGAGCAGGTCGTGAATTGCAAAGATGAGTTGGCTCAATTCTACTTGATGGATTGCATAATTCAAGTCTTCCCGGATGAGTATCACTTGCAAACTCTTGATGTGTTGTTGGGTGCTTACCCTCAACTTCAGCCATCTGTTGACATCAAGACAGTACTATCCCAGTTAATGGAAAGGCTTTCAAATTATGCTGCTTCAAGTGCTGAGGTGTTGCCTGAGTTTTTGCAGGTGGAAGCATTTTCCAAATTAAGCAATGCAATCGGCAAGGTGATAGAGGCACAGCCTGACATGGCCACTGCTGGAGTTGTAACTTTATATTCATCTCTTCTTACCTTCACTCTTCATGTCCACCCCGATCGACTAGATTATGCTGATCAAGTCTTGGGAGCATGTGTGAAAAATCTCTCTGGCAAAGGTAAAATTGAGGACAAGAAGGCAACGAAGCAGATTGTTGCTTTATTAAGTGCTCCACTAGAGAAATACAATGACATTATGACTGCCTTGAAGCTTTCAAACTATCCTCGTGTAATGGAATTCCTTGACATTCCAACTAATAAGGTCATGGCAACTGTTATTATTCAAAGCATTATGAAAAATGCAACACGCATTTCTACTTCAGACAAGGTTGAAGCGTTGTTTGAACTGATAAAAGGGCTTATCAAGGATTCTGATGTGACTCCTAATGATGAGCTGGACGAGGATGATTTCAAAGAGGAGCAGAATTCTGTTGCACGTCTGATCCAGATGCTTTATAATGAGGATCCAGAAGAGATGTTTAAGATCATTGAAACTGTGAGGAAGCACATACTGACTGGAGGACCAAAGCGTCTGCCTTTCACCGTTCCACCTCTTATGTTTTCTTCTTTGAAGTTGGTCAGACAGTTGCAAGGTCAAGGTCAAGAAGAAAATCCTTTTGGGGATGATTCGGCAACATCACCAAAGAAAATCTTTCAGCTTTTAAATCAGACCATCGAGACTCTGTCAGGTGTTCTGGCACCAGAGTTAGCATTGCAGTTGTGCTTGCAATGTGCTGAGGCTGCAAATGACTGTGAGTTGGAACCAGTTGCATATGAATTTTTTACGCAAGCTTATATTCTATACGAAGAAGAAATTTCTGATTCCAGAGCACAGGTCACAGCTATCCATTTAATAATAGGAACTCTTCAAAGGATGCATGTCTTTGGCGTTGAGAACAGGGATACTTTAACTCACAAGGCCACAGGGTATTCAGCGAAGCTTTTAAAGAAGCCAGATCAATGCAGAGCTGTGTATGCGTGCTCACATTTGTTTTGGGTTGATGATCATGATAACATGAAAGATGGAGAGAGAGTCCTATTATGCCTTAAGCGAGCTTTAAGGATTGCAAATGCTGCACAACAAATGGCAAATGCTGCACGGGGTAACACCGGATCAGTAATGCTTTTCATTGAGATTTTGAACAAGTATCTTTACTTTTTTGAGAAGGGGAACCCACAGGTGACAGTTGCTGCTATCCAGGGCCTAATTGAGTTAATTATGAATGAAATGCAAAGTGACACTGCGACTTCAGATCCATCTGCAGATGCTTTCTTAGCCACTACTATGCGCTATATACAGTTCCAAAAACAAAAGGGTGGTACAGTTGGTGAGAAATATGAACCGATCAAGGTTTGA 2379 0.4245 MMLDGTEDEEKFLAAGIAGLQQNSFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKYYELYMRAFDQLRKLEMFFEEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKEAPAKDVLKDLVEMCRGIQNPVRGLFLRSYLSQVSKDKLPDIGSEYEGDADTVSDAVEFVLQNFTEMNKLWVRMQHQGPSREKEKREKERSELRDLVGKNLHVLSQIEGVDLDMYKDVVLPRVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGAYPQLQPSVDIKTVLSQLMERLSNYAASSAEVLPEFLQVEAFSKLSNAIGKVIEAQPDMATAGVVTLYSSLLTFTLHVHPDRLDYADQVLGACVKNLSGKGKIEDKKATKQIVALLSAPLEKYNDIMTALKLSNYPRVMEFLDIPTNKVMATVIIQSIMKNATRISTSDKVEALFELIKGLIKDSDVTPNDELDEDDFKEEQNSVARLIQMLYNEDPEEMFKIIETVRKHILTGGPKRLPFTVPPLMFSSLKLVRQLQGQGQEENPFGDDSATSPKKIFQLLNQTIETLSGVLAPELALQLCLQCAEAANDCELEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDHDNMKDGERVLLCLKRALRIANAAQQMANAARGNTGSVMLFIEILNKYLYFFEKGNPQVTVAAIQGLIELIMNEMQSDTATSDPSADAFLATTMRYIQFQKQKGGTVGEKYEPIKV* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1135 792 Pfam Vacuolar protein sorting-associated protein 35 13 749 IPR005378 GO:0015031|GO:0030906|GO:0042147
Tpr2g1135 792 Gene3D - 465 777 IPR042491 -
Tpr2g1135 792 PANTHER VACUOLAR SORTING PROTEIN 35 2 792 IPR005378 GO:0015031|GO:0030906|GO:0042147
Tpr2g1135 792 SUPERFAMILY ARM repeat 220 754 IPR016024 -
Tpr2g1135 792 PIRSF Retromer_Vps35 2 792 IPR005378 GO:0015031|GO:0030906|GO:0042147
Tpr2g1135 792 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A 2 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1135 Tpr-Chr2 13263343 13273103 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1135 K18468 - gmx:100811902 1450.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1135 2 13263343 13273103 Tpr2g1135 2 13263343 13273103 ECH