Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1088 ATGGACCGTCGAGGTTGGCCGTGGAAGAAAAAATCGTCCGATAAAATCACAAAGGCGGATATACCATTTGTTACACCTGACTCTGTTGGTTCCACCTTATCTTCTGTGGCACATTTAGGAAATCAGCAGGAAAACTGCACAAATAAGAACTATGTTCAAATTTCAATGGAGTCATACACGCGTATGTCTGGATTGGAAGATCAAGTTGTGAACCTGGAGGGTCAAGTAAAAGATTTGGAATCAAAGCTATCAGCAGCTTATTCAGAGTTAGATAACAAGGAAAATCTGGTTAAACAACATGCAAAAGTTGCCGAGGAAGCAGTCTCAGGTTGGGAGAAAGCTGATGCAGAAGTAGTTTCCTTAAGATGTCAACTTGAATCGATGACCCTCTCAAAGCTTAGTGTTGATGAGAGAGCAACTCACTTAGATGGAGCTCTGAAAGAATGCATGAAGCAGATAAGAACTGTAAAGGAGGAAAGCGAGCAGAAAATACAGGACGTGATTCTAATGAAATCTCAACAGTGGGAGAAATTCAAGTTAGAGCTTGAAGCAGAAATAGACAAATTGGATAAAGGACTTCGTGAAGAAGCTCGTGAAAATGCTGCACTTCTGAGATCACTACATGAAAGTTCGAATAAAATAGTGAAACTAAAAGAAGAAAAGTCTGAAGTTGAGTCCTCGTTAGAGCTTCAAAAGAAGAATGTTCAGTCATATGAAAAAGAAATAAATTCATTGAAGTATGAGCTGCATATGATTTCTAAGGAGATGGATATCCGCAATGAAGAGAAAGACATGATTATGAAATCAGCAGAAGTGGCAAACAAACAACGCACTGAGGATGTTAGGATCATTACCAATCTAGAGGGAGAGTGCCAACGGCTTCGCGGTCTTTTGCGAAAGAAGTTACCTGGACCTGCTGCATTGGCACAAATGAAGCTCGAAGTTGAAAGTACACGCCACGTCATTAGTGGAATCCATCAAAGAAAAACAAGTAGCTTGCAAGAATCCGAGTTTCTTAATATGTCGAAACAATTGGAGTTGTTTGAAGAAGAAACAAAGAGATTGAAAGAAGCTTTGGCCTCAAGTAAAGCTGAACTGCAGGCTTCTAGGAACTTGAACACTACAACAGTTGGCAGACTTAAGAGCTTAGAAGCTGAGGTACAAGTTCTTTATCAAGAAAGAAGTTCGCAGAAATCAAATTTGGCAATTAATTACCAAAATTCTTCAAGTAGAATTTGTAGCAATTCACCAAGCATCACTTCTATATCTGATGGTTGGCATGAGGATCCGGAAAGTCCTGTTGAGTCATCTACAGACTCAACTTCTGATCATTTTCATGTAAGGAGAGTTAGAAGCTCAGTTAAATTTGAGAGTCACAAAAGTGAAACTATCTCAGAACTGATGGACGATTTCCTCGAAGTGGAGAAAATGGCATCTTCATCAGACAATGACAGTGTACAGATTGCTGACAAAGTTAAGAACGACTCTGAAGATAAACAATTGAAATCAAATGATGCTTTGGTTGAGATTCAGCTGAAATGTATGACAGAGTCTTATAAGTCACTTCAAACACATGTAGAAGAGTTAGAAGCTGAAAATAAGTTTCTTAAGGAAAAGATTGATGAGCTAAAGAATGATCTCGAGGAGGAAAAACAATGTCATCACGATATTTTGGTTAGATACAAAGAAATTGAAGAAAAAATGCCAAGGGACAAGTGCCTGTTGTGTGCATCGAATTCGGAAGCAAATAATGACATCAATACTCGGAAGGATACGGAACTAGCAGCTGCAGAGAAAAAGCTAGCAGAATGTCAAGAGACTCTGCATGTACTTGGCAGGCAATTACAAGCAATGAGCCCACAAATTGGCTCTAAAAGACTTCAAACAAACGAATCATCGGTTAAACCGAATTATGGCTGGTCAAATTCTAATGGCTCCTATAATAACTCAGACGAAATTGATCATGCTGAAGCATACAGTGTATCTTCTAATTCTGACATTCAAGGAGTGAATGATGAGTTTTCATCATCTCACAACTTTGGTTCCATGTCATGTCTATCAGACGCCGAATGCAACATTTCAGTAAATTCTTCAACAGAGTCAAGCCAGAGTTGTTATATGCTTACTGAATCACATTCCCATTCTTCCGGTTCTGCTACCGGGAAACAACATGCACATGGTTCGAGTCACTTTTTTTCTTCCAAAGAGAAAACTAGTCACTAG 2223 0.3905 MDRRGWPWKKKSSDKITKADIPFVTPDSVGSTLSSVAHLGNQQENCTNKNYVQISMESYTRMSGLEDQVVNLEGQVKDLESKLSAAYSELDNKENLVKQHAKVAEEAVSGWEKADAEVVSLRCQLESMTLSKLSVDERATHLDGALKECMKQIRTVKEESEQKIQDVILMKSQQWEKFKLELEAEIDKLDKGLREEARENAALLRSLHESSNKIVKLKEEKSEVESSLELQKKNVQSYEKEINSLKYELHMISKEMDIRNEEKDMIMKSAEVANKQRTEDVRIITNLEGECQRLRGLLRKKLPGPAALAQMKLEVESTRHVISGIHQRKTSSLQESEFLNMSKQLELFEEETKRLKEALASSKAELQASRNLNTTTVGRLKSLEAEVQVLYQERSSQKSNLAINYQNSSSRICSNSPSITSISDGWHEDPESPVESSTDSTSDHFHVRRVRSSVKFESHKSETISELMDDFLEVEKMASSSDNDSVQIADKVKNDSEDKQLKSNDALVEIQLKCMTESYKSLQTHVEELEAENKFLKEKIDELKNDLEEEKQCHHDILVRYKEIEEKMPRDKCLLCASNSEANNDINTRKDTELAAAEKKLAECQETLHVLGRQLQAMSPQIGSKRLQTNESSVKPNYGWSNSNGSYNNSDEIDHAEAYSVSSNSDIQGVNDEFSSSHNFGSMSCLSDAECNISVNSSTESSQSCYMLTESHSHSSGSATGKQHAHGSSHFFSSKEKTSH* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1088 740 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 506 697 - -
Tpr2g1088 740 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 503 - -
Tpr2g1088 740 Pfam Filament-like plant protein, long coiled-coil 93 500 IPR008587 -
Tpr2g1088 740 Pfam Filament-like plant protein, long coiled-coil 500 621 IPR008587 -
Tpr2g1088 740 Coils Coil 587 614 - -
Tpr2g1088 740 Coils Coil 62 96 - -
Tpr2g1088 740 MobiDBLite consensus disorder prediction 711 728 - -
Tpr2g1088 740 MobiDBLite consensus disorder prediction 621 642 - -
Tpr2g1088 740 Coils Coil 345 365 - -
Tpr2g1088 740 Coils Coil 179 255 - -
Tpr2g1088 740 SUPERFAMILY Tropomyosin 60 264 - -
Tpr2g1088 740 Coils Coil 512 553 - -
Tpr2g1088 740 PANTHER FILAMENT-PLANT-LIKE PROTEIN 506 697 - -
Tpr2g1088 740 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 503 - -
Tpr2g1088 740 Coils Coil 380 400 - -
Tpr2g1088 740 MobiDBLite consensus disorder prediction 711 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1088 Tpr-Chr2 12774842 12780182 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1088 - - gmx:100809230 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1088 2 12774842 12780182 Tpr2g1088 2 12774842 12780182 ECH