Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1059 ATGAAATCTCTAAATTTTCTTCTATTTTCACTCATCATAGTTTCATCAACAACACTACTAAAATTTTCAGAATCAAAAACCCATTGGGAAGACATAAAAGCTCTAAAACAATTCAAACAAAACATAAACCCTGATTCAGTGAAACCAGGTTCATGCGTGAACACATGGAACTTCACCTTCGACCCATGTGAAAATCTCTTTAGCGACAAATTTACCTGCGGATTCAGATGTGACATCACCGTTTCAAAACTCAGTCGAGTCACCGAACTCACTCTCGATCAAGCTGGTTACACCGGTTCACTCACTTCCCTCAATCTTCCTTACCTCGAAATTCTCGAACTTTCAAACAACTACTTCACCGGTTCAATTCCCGATTCTCTTTCATACTTAACTCGCCTGAGTCGACTCAGTCTATCATCTAACTCGTTCACCGGAGAAATACCATCTTCCATTGGATCTTCACTTTCAAATCTTCAAGAACTTTATCTCGATAACAACAATCTTCAAGGAACGATTCCTTCAACTTTCAACAATCTTAAAAGCTTAACAAAACTCGAACTTCAAGAAAACAACCTCACCGGAAAATTTCCCGATTTGGGTTCTCTGCAAAATCTCTACTACATAGATCTCAGTAACAATGAATTCTCCGGTGACCCATTTGAATTTACGGTGACATTACCGGTTTCTTTAGTTCAGATTTCAATGAGGAACAATAAATTAACCGGTTTAAGCTCTGAAAGCTTCAAGAATTTGAATTATTTACAAGTTATTGATTTCAGTTCAAACAAAATCAATGGCAATGTTCCTTCTATATTCTTTCAGCTTCCATCGTTACAACAACTAACACTTTCATTCAACGAGTTTTCATCCATTGAAGCTCCTTCATTTGGAACAGAGTCACTTCAAAACGAGCTTATAGCAGTTGATATAAGCAATAATCAGCTTCAAGGTTTTTTACCATCTTTTTTAGCTTTTTTACCAAAGTTATCTTCTTTATCTTTGGAGAATAACCGGTTCACTGGTTTAATACCGGTTCAGTTTGCATTAAAAACAGTTTTTCCAGAAACTGGTATTGCTCCATTTGGGAGACTTTTATTGGGGGGAAATTATTTGATTGGTGGAATACCTCGTCCTTTGCTTGTTCTTAAACAAGATTCTGCTAATGTTAGTTTAGTTGATAATTGTTTGTTTAGGTGTCCTCATGTTTTCTTTTTTTGTCAAGGTGGAACACAGAAATCTTCTGATGAATGTAGTAATGTAATTATTCCTTAG 1272 0.3601 MKSLNFLLFSLIIVSSTTLLKFSESKTHWEDIKALKQFKQNINPDSVKPGSCVNTWNFTFDPCENLFSDKFTCGFRCDITVSKLSRVTELTLDQAGYTGSLTSLNLPYLEILELSNNYFTGSIPDSLSYLTRLSRLSLSSNSFTGEIPSSIGSSLSNLQELYLDNNNLQGTIPSTFNNLKSLTKLELQENNLTGKFPDLGSLQNLYYIDLSNNEFSGDPFEFTVTLPVSLVQISMRNNKLTGLSSESFKNLNYLQVIDFSSNKINGNVPSIFFQLPSLQQLTLSFNEFSSIEAPSFGTESLQNELIAVDISNNQLQGFLPSFLAFLPKLSSLSLENNRFTGLIPVQFALKTVFPETGIAPFGRLLLGGNYLIGGIPRPLLVLKQDSANVSLVDNCLFRCPHVFFFCQGGTQKSSDECSNVIIP* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1059 423 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 6 419 - -
Tpr2g1059 423 Gene3D Ribonuclease Inhibitor 198 405 IPR032675 -
Tpr2g1059 423 Gene3D Ribonuclease Inhibitor 29 197 IPR032675 -
Tpr2g1059 423 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 6 419 - -
Tpr2g1059 423 SUPERFAMILY L domain-like 79 347 - -
Tpr2g1059 423 Pfam Leucine rich repeat 156 214 IPR001611 GO:0005515
Tpr2g1059 423 Pfam Leucine rich repeat 230 287 IPR001611 GO:0005515
Tpr2g1059 423 SMART LRR_typ_2 155 178 IPR003591 -
Tpr2g1059 423 SMART LRR_typ_2 130 154 IPR003591 -
Tpr2g1059 423 SMART LRR_typ_2 179 202 IPR003591 -
Tpr2g1059 423 SMART LRR_typ_2 228 250 IPR003591 -
Tpr2g1059 423 SMART LRR_typ_2 275 298 IPR003591 -
Tpr2g1059 423 SMART LRR_typ_2 326 349 IPR003591 -
Tpr2g1059 423 Pfam Leucine Rich Repeat 109 129 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1059 Tpr-Chr2 12422311 12424075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1059 65 379 Receptor kinase-like Gene Family AT2G15080 29.396 1.31e-22 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1059 - - gmx:100811366 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1059 2 12422311 12424075 Tpr2g1059 2 12422311 12424075 ECH