Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1029 ATGGTCAAGAAAACAGTCTTGAAGGTTGATATTGATTGTCTCAAATGCAAAAAGAAACTCATCAAAACCGTTTCTTCTCTTCAAGGTATAAACAAAATTGAAGCAGATGAAGGAAAAGGAACATTGACCATAATAGGGGATGCAGACCCATATGACATAATAGTTCGAATAAGGAAAGCTGGAAAAAATGCTGAAGTTGTGAGTATTGGGCCTCCACCTGGCCCACCTCCTCCAAAACAGGATGCTCCAAAGAAGCCTGAAGAAAAGCCTAAGGCCGAAGAAAAAAATAAGCCCGACCCGGTAAAGAATCTGGACCAAATATCTTATGTGCCCTATATGCAGATGCCTTATTACTACCCACAATACCAGGCCCAACCAGTTACTGTGGTGCACATGACTAGGTGGGACGAGCCCAATGCATTTTGCACTATAATGTGA 438 0.4201 MVKKTVLKVDIDCLKCKKKLIKTVSSLQGINKIEADEGKGTLTIIGDADPYDIIVRIRKAGKNAEVVSIGPPPGPPPPKQDAPKKPEEKPKAEEKNKPDPVKNLDQISYVPYMQMPYYYPQYQAQPVTVVHMTRWDEPNAFCTIM* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1029 145 SUPERFAMILY HMA, heavy metal-associated domain 1 67 IPR036163 GO:0046872
Tpr2g1029 145 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 145 - -
Tpr2g1029 145 MobiDBLite consensus disorder prediction 81 101 - -
Tpr2g1029 145 Pfam Heavy-metal-associated domain 7 62 IPR006121 GO:0046872
Tpr2g1029 145 ProSiteProfiles Heavy-metal-associated domain profile. 11 66 IPR006121 GO:0046872
Tpr2g1029 145 Gene3D - 1 72 - -
Tpr2g1029 145 MobiDBLite consensus disorder prediction 65 103 - -
Tpr2g1029 145 PANTHER OS04G0661100 PROTEIN 2 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1029 Tpr-Chr2 12142602 12143813 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1029 - - mtr:MTR_5g020960 149.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1029 2 12142602 12143813 Tpr2g1029 2 12142602 12143813 ECH