Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1025 ATGAAACATTTTGTTTTGTTTTTCCTTTTGGCCATTTTGGTCCATCAAGAGTACTATTGTTTCAATGTAGAAGCTTCTGGTGGTGATGGTTTTGTAAGAACAAGAGGCATCCACTTCATGTTAAATGGAAATCCTTACTATGCAAATGGATTTAATGCTTATTGGTTAATGTATACAGCTGCTGATCCTTCCCAGAGATTCAAAGTTTCAAATGCTTTTCATGAAGCAACTTCTCATGGTCTTACTGTTGCTAGAACTTGGGCTTTCAGTGATGGTGGTTATAGTCCTTTACAATATTCTCCTGGCTTTTATAATGAACAAATGTTTAAGGGGTTGGATTTTGTTATAGCTGAGGCTAGAAAGCATGGGATTAAGCTCATACTAAGCTTGGTGAACAACTATGAGAGTTTTGGAGGAAAGAAGCAATATGTGAATTGGGCTAGAAGTAATAATGGACAGTATTTGACATCAGATGATGATTTCTTTAGGAACCCTGTTGTTAAAGGTTTCTACATCAACCATGTTAAGACTGTTCTTAACAGGTACAACAGTTTTACTGGAATTCATTACAAAGATGACTCAACAATAATGGCATGGGAGCTTATGAATGAACCTAGGTGTACATCAGATCCTTCAGGAAGAACTATTCAGGCTTGGATTACGGAAATGGCTTCTTTAGTAAAGTCAATTGACAGGAATCACTTGCTGGAAGCTGGACTTGAAGGGTTTTATGGTCAATCAACACCACAAAGGACACAATTGAATCCTGCTTTGAACATAGGAACAGATTTCATTGCCAACAATCGAATCCCAGACATTGATTTTGCAACAGTTCATTGTTACCCCGACCAATGGGAACAAAATTCAAATGAGCAAGATCAACTAGCATTTTTGAATAACTGGCTCAATGCTCATTTCCTAGATGCACAATATGCTCTAAAGAAACCAATACTTGTAGCAGAATTCGGAAAATCATTCAAAGATTCCGGTTACAGTACCTACCAGAGAGATCAACTTTTCAATACCGTGTACTACAAGATATATGCGTCTGCGAAAAGAGGCGGTCCTGCGAGTGGAGCAATGTTTTGGCAACTTCTTACCGAAGGAATGGAATCTTTCGACGATGGATATGGAATAACGCTTGGCCAGAGTTCTTCTACTGCTAATGTCATTGCTCAGCAATCTCATAAGTTATACCTTATTCGGAAGATCTACGCGAGGATTGCTAATGAAAGAAGATGGAAAAGAGCTAGAGGTAATCGAAGGTCTTCGCGATTTGGTGGAAATAGAGGAGGACAAATTGGGTTTTGA 1311 0.3852 MKHFVLFFLLAILVHQEYYCFNVEASGGDGFVRTRGIHFMLNGNPYYANGFNAYWLMYTAADPSQRFKVSNAFHEATSHGLTVARTWAFSDGGYSPLQYSPGFYNEQMFKGLDFVIAEARKHGIKLILSLVNNYESFGGKKQYVNWARSNNGQYLTSDDDFFRNPVVKGFYINHVKTVLNRYNSFTGIHYKDDSTIMAWELMNEPRCTSDPSGRTIQAWITEMASLVKSIDRNHLLEAGLEGFYGQSTPQRTQLNPALNIGTDFIANNRIPDIDFATVHCYPDQWEQNSNEQDQLAFLNNWLNAHFLDAQYALKKPILVAEFGKSFKDSGYSTYQRDQLFNTVYYKIYASAKRGGPASGAMFWQLLTEGMESFDDGYGITLGQSSSTANVIAQQSHKLYLIRKIYARIANERRWKRARGNRRSSRFGGNRGGQIGF* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1025 436 PANTHER - 1 422 IPR045053 GO:0004553
Tpr2g1025 436 SUPERFAMILY (Trans)glycosidases 31 391 IPR017853 -
Tpr2g1025 436 Pfam Cellulase (glycosyl hydrolase family 5) 68 335 IPR001547 GO:0004553|GO:0071704
Tpr2g1025 436 Gene3D Glycosidases 28 402 - -
Tpr2g1025 436 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 1 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1025 Tpr-Chr2 12114667 12118344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1025 1 434 Glycoside Hydrolase AT5G66460 66.820 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1025 K19355 - gmx:100792073 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1025 2 12114667 12118344 Tpr2g1025 2 12114667 12118344 ECH