Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1022 ATGGGAACATTGGGCAGAGCTTTCTACGCCGTCGGATTCTGGATCCGCGAAACCGGTCAAGCCATTGATCGTCTCGGTTCTCGTCTCCAAGGCAACTACTTCTTCCAAGAACAACTGTCAAGGCATCGAACTTTGATGAATGTATTTGATAAAGCTCCTTATGTTCATAAGGATGCGTTTATTGCTCCTAGTGCTTCCATTACTGGTGATGTTCAGATTGGTCAATCTTCTTCCATTTGGTATGGATGTGTTCTAAGAGGTGATGTTAACAGCATTACTATTGGATCTTCGACTAATATTCAAGACAATTCTCTTGTTCATGTTGCTAAGTCTAATTTGAGTGGAAAGGTTTTACCTACTATCATCGGAGACAATGTCACTGTAGGTCACAGTGCTGTGTTACAAGGTTGTACTGTTGAGGATGAGGCATTCATTGGCATGGGTGCAACCTTGCTTGATGGTGTGTATGTTGAGAAACATGCCATGGTTGCTGCTGGAGCTCTTGTCAGACAGAATACAAGGATCCCCTGTGGAGAGGTTTGGGGAGGCAATCCAGCAAGGTTCTTGAGGAAGCTCACAGAAGATGAAATGACATTCTTCTCACAATCTGCCCTAAATTATTCCAATTTGGCTCAGGCTCATGCTGCTGAAAATGCAAAAAAGCTGGATGAGACTGAATTTGTGAAAGTTCTTGGCAAGAAGTTTGCTCGACCTGACGAAGATGCTTCACTACTCGACGCTGTTCGTGACACAACTCCAGGGATTAACCACCCTGTGTTAGATAATGCTCCAAAGGCTTCTTAA 804 0.4378 MGTLGRAFYAVGFWIRETGQAIDRLGSRLQGNYFFQEQLSRHRTLMNVFDKAPYVHKDAFIAPSASITGDVQIGQSSSIWYGCVLRGDVNSITIGSSTNIQDNSLVHVAKSNLSGKVLPTIIGDNVTVGHSAVLQGCTVEDEAFIGMGATLLDGVYVEKHAMVAAGALVRQNTRIPCGEVWGGNPARFLRKLTEDEMTFFSQSALNYSNLAQAHAAENAKKLDETEFVKVLGKKFARPDEDASLLDAVRDTTPGINHPVLDNAPKAS* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1022 267 CDD LbH_gamma_CA_like 55 212 - -
Tpr2g1022 267 Gene3D Hexapeptide repeat proteins 43 223 - -
Tpr2g1022 267 PANTHER DYNACTIN SUBUNIT P25 1 266 - -
Tpr2g1022 267 PANTHER YRDA, PUTATIVE-RELATED 1 266 - -
Tpr2g1022 267 SUPERFAMILY Trimeric LpxA-like enzymes 47 212 IPR011004 -
Tpr2g1022 267 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1022 Tpr-Chr2 12096791 12100523 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1022 K01726 - gmx:100794184 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1022 2 12096791 12100523 Tpr2g1022 2 12096791 12100523 ECH