Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1000 ATGGCAAGCTTGAGCGGTTTCATGTCTGTGTTAACCTTTCTCTTATTCCTCTTTGTTGATTTAATGTCTTCATCTGAAGCTGCCATAAAGAAATACCAGTTTGATATTCAAGTGAAGAATGTGAGTAGGTTGTGCCATGCAAAACCTATTGTAACTGTAAATGGGAGATTCCCAGGGCCAACTATCTATGCTAGGGAAGGAGATCAAGTTTTTGTCAATGTTACCAACCATGCACAATACAACATGTCTATTCATTGGCATGGACTTAAACAGTATCGTAACGGTTGGGCGGATGGACCAGCTTATATCACACAGTGTCCGATACAGACCGGAAACAGCTATACTTATGAATTCAACGTTACTGGGCAGAGAGGAACACTATGGTGGCATGCACACATTCTTTGGCTGAGGGCTACTGTCTATGGTGCAATAGTAATTATGCCTAAACTTGGAACACTGTTTCCTTTTCCACAGCCAGCAAGAGAATTTGAAATTCTCCTAGGTGAATGGTGGAACAATGATGTGGAAGAGATTGTAAAGCAAGGAAACAAAATGGGGTTACCACCGAATATGTCAGATGCACATACAATCAATGGAAAACCAGGACCACTCTTTCCTTGTTCAGAGAAACACACATTTGCGATGGAGGTAGAGCAAGGGAAGACATACCTCCTGAGAATCATCAATGCTGCACTCAACGACGAGCTTTTCTTTGCAATTGCGGGTCACAATATGACAGTAGTGGAGGTTGATGCTGTTTATACAAAACCATTCACCACTCAGGCAATACTAATTGCTCCTGGTCAAACCACAAACGTTCTGGTTCATGCGAACCAAGTTTCTGGCAGGTTCTTCATGGGCACCAAGGCTTTTATGGATGCCCCAGTTCCAGTTGACAACAAAACTGCTACAGGTATACTTCAATATAAAAACATTCCAAACACTGTCCTACCCGTTCTTCCACAGTTGCCAGCTAGCAATGACACAGGTTTTGCTTTGAGTTACAACACGAAACTCAGAAGCTTAAACTCTGCTAAATACCCTGCCAATGTTCCACTCAAAGTTGATAGAAACCTCTTTTACACTATTGGTTTAGGCAAAAATTCTTGCCCTACATGCCTCAATGGAACCCGGTTTCTTGCTTCCATAAACAATGTATCCTTTGTGATGCCTCAAACTGCGCTTCTCCAAGCTCACTACTTCGATATCAAGGGTGTTTTCAGAGCTGATTTTCCCGATAACCCTCCAATTCCTTTCAACTATACCGGTGTGCCATTAACGGCCAATCTTGGTACTTCAACAGGCACAAGAGTAAACCAGATTGCGTTCAATTCTACCGTGGAACTAGTTTTGCAGGATACCAATCTCCTCACAGTTGAATCACATCCGTTTCATCTTCATGGATATAACTTTTTTGTTGTTGGAACTGGTATTGGTAATTTTGATCCTGCTAAAGACCCTGCTAAATACAACTTGGTAGATCCTATGGAGAGGAACACTGTTGGGGTTCCCACTGGTGGTTGGACAGCAATTCGTTTTCAGGCAGATAATCCAGGTGTTTGGTTCATGCATTGTCATTTGGAGCTGCATACTGGTTGGGGGTTGAAAACAGCTTTCCTTGTCGAAAATGGACCAGAACAAAGTCAATCTGTTCTGCCACCACCAAAGGACCTTCCATCATGCTAG 1686 0.4265 MASLSGFMSVLTFLLFLFVDLMSSSEAAIKKYQFDIQVKNVSRLCHAKPIVTVNGRFPGPTIYAREGDQVFVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIQTGNSYTYEFNVTGQRGTLWWHAHILWLRATVYGAIVIMPKLGTLFPFPQPAREFEILLGEWWNNDVEEIVKQGNKMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVEQGKTYLLRIINAALNDELFFAIAGHNMTVVEVDAVYTKPFTTQAILIAPGQTTNVLVHANQVSGRFFMGTKAFMDAPVPVDNKTATGILQYKNIPNTVLPVLPQLPASNDTGFALSYNTKLRSLNSAKYPANVPLKVDRNLFYTIGLGKNSCPTCLNGTRFLASINNVSFVMPQTALLQAHYFDIKGVFRADFPDNPPIPFNYTGVPLTANLGTSTGTRVNQIAFNSTVELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPAKDPAKYNLVDPMERNTVGVPTGGWTAIRFQADNPGVWFMHCHLELHTGWGLKTAFLVENGPEQSQSVLPPPKDLPSC* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1000 561 CDD CuRO_1_LCC_plant 32 148 IPR034288 GO:0005507
Tpr2g1000 561 Pfam Multicopper oxidase 36 149 IPR011707 GO:0005507
Tpr2g1000 561 PANTHER LACCASE 9 561 - -
Tpr2g1000 561 ProSitePatterns Multicopper oxidases signature 1. 519 539 IPR033138 -
Tpr2g1000 561 PANTHER MULTI-COPPER OXIDASE 9 561 IPR045087 -
Tpr2g1000 561 SUPERFAMILY Cupredoxins 156 342 IPR008972 -
Tpr2g1000 561 CDD CuRO_2_LCC_plant 165 309 IPR034285 -
Tpr2g1000 561 Gene3D - 19 148 IPR008972 -
Tpr2g1000 561 Pfam Multicopper oxidase 165 311 IPR001117 -
Tpr2g1000 561 TIGRFAM laccase: laccase 27 561 IPR017761 GO:0046274|GO:0048046|GO:0052716
Tpr2g1000 561 Gene3D - 160 345 IPR008972 -
Tpr2g1000 561 Gene3D - 371 561 IPR008972 -
Tpr2g1000 561 SUPERFAMILY Cupredoxins 352 561 IPR008972 -
Tpr2g1000 561 CDD CuRO_3_LCC_plant 406 544 IPR034289 GO:0005507
Tpr2g1000 561 ProSitePatterns Multicopper oxidases signature 2. 524 535 IPR002355 GO:0005507
Tpr2g1000 561 Pfam Multicopper oxidase 411 543 IPR011706 GO:0005507|GO:0016491
Tpr2g1000 561 SUPERFAMILY Cupredoxins 30 173 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1000 Tpr-Chr2 11955157 11957920 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1000 K05909 - gmx:100798427 1049.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1000 2 11955157 11957920 Tpr2g1000 2 11955157 11957920 ECH