Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0993 ATGTCCACCGCTAAATTAACCTCATGCGCCGCCATAGCAGCCGCCGCAGCGGCTTCAATGTCCACTCGCTCCGATCGTGCTTATTCCGAATCTTACTTTCGTTTCCCTTTTTTCTCTTCTTCACCTTCCAATTCATCTTCTCCGACGGACCAATCATCTGACAACAAGTCGGAGTCTCCACCTTCTGAAGAATCTAACAACTCCGGTTTTGATCCTCAATCGTTTGAAAGAGCTGCTAATGCTTCCCGTGAAATCAAAAATTCTCCTCATTTCAAAAAGGTGAAGGAATTACTGTATAAACAGGAACAAACTCGGCTTGCCGAGATAGATGCTGAAAAAATTCATTATGAACTTATTCAGATTCAAGGAGATATTGACAGGGTGCGTAACATGTACGAAGAACAACGGAATCTAATACAAGAGCAGAACCAGAGGCAGGCTCAGGTGTTACGATTGGAAGATGAACATGCAAGGAAAAGATTGCAGACAGATCACGAAAACCAAAGGCGACATAATGCTGAGTTGGTCCAGATGCAAGAGAAATCTTCTGAAAGAAAGGAGCAGGCAAGACAGGCTACTGAAGAACAGATTCAATCTCAGAAGCGTCAGACTGAAAGAGAGAGAGCTGAAATAGAAAGAGAAACCATTAGAGTTAAGAAAATGGCAGAGGCTGAAGCCAATGTCCTTGAGGCAAAATTGACTGCGGATCATAACAGCAGAATGCTTATAGATCGGATGCATGGGGAAAGGGATAAATGGCTTGCTGCAATTGACGCTACTTTTAGTCATATTGAAGGTGGTCTAAGGGTCTTATTGACCGATAGGGACAAATTGCTTATGGCTGTTGGAGGAGCTACTGCATTAGCTGCAGGAGTATATACAACAAGAGAAGGTGCAAAAGTTTCATGGGGCTATATTAATCGGATTTTGGGGCAGCCATCATTGATCCGGGAATCATCCATGGCAAAGTTTCCAGGATCAAGGTTTCTGTCTCAAGCCAAAAATAAAGTTTTAAATTATAGTACCTTGGCTAAGGCAGAAAAGCCTGTTGGGAGTCAAAATGGACTTGGAAATGTAATCCTGCATCCATCATTGCAGAGAAGAATAGCGCATCTAGCACGGGCAACATCAAATACCAAGGCCCATCAGGCACCATTTCGTAACATGCTTTTTTATGGGCCTCCTGGGACTGGCAAAACCATGGTTGCAAGGGAAATAGCTAGAAAATCGGGTTTGGATTATGCAATGATGACCGGAGGAGATGTTGCGCCTCTGGGCCCACAAGCTGTTACCAAAATTCATGAGATATTCGATTGGGCCAAGAAATCTAAAAGAGGCCTATTGCTTTTTATTGATGAGGCAGATGCTTTCCTTTGCGAGCGGAACAGCATACACATGAGTGAAGCCCAACGAAGCGCCCTAAATGCACTGCTTTTCAGAACTGGTGATCAGTCTAGAGACATAGTACTTGTGCTTGCCACAAACAGACCAGGAGATCTAGATAGTGCAATTACTGATCGGATTGACGAAGTGATTGAATTCCCAGTCCCAGGAGAGGAGGAACGTCTTAAGTTATTGAACCTCTATTTGAACAAGTATCTACGTGATGAAAGTAATAATTCCAAGGGGGGCTTATTTCTTAAGAAGCAACCCCAGAAGATTACCATAAAAGATATATCCGAAGATGTGCTGAAAGAGGCTGCAAAGAAAACAGAGGGGTTTTCTGGCCGTGAGATAGCCAAACTCATGGCCAGCGTTCAAGCGGCTGTCTATGGGCGCCCTGACTGCTCCTTGGATTCTAAGTTGTTTAAAGAAATTGTAGATTACAAGGTGGTGGAACATCATCAGAGATTAAAACTGGCAGCTGAAGGCGGCCTCCCTGCATGA 1887 0.4393 MSTAKLTSCAAIAAAAAASMSTRSDRAYSESYFRFPFFSSSPSNSSSPTDQSSDNKSESPPSEESNNSGFDPQSFERAANASREIKNSPHFKKVKELLYKQEQTRLAEIDAEKIHYELIQIQGDIDRVRNMYEEQRNLIQEQNQRQAQVLRLEDEHARKRLQTDHENQRRHNAELVQMQEKSSERKEQARQATEEQIQSQKRQTERERAEIERETIRVKKMAEAEANVLEAKLTADHNSRMLIDRMHGERDKWLAAIDATFSHIEGGLRVLLTDRDKLLMAVGGATALAAGVYTTREGAKVSWGYINRILGQPSLIRESSMAKFPGSRFLSQAKNKVLNYSTLAKAEKPVGSQNGLGNVILHPSLQRRIAHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGPQAVTKIHEIFDWAKKSKRGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITDRIDEVIEFPVPGEEERLKLLNLYLNKYLRDESNNSKGGLFLKKQPQKITIKDISEDVLKEAAKKTEGFSGREIAKLMASVQAAVYGRPDCSLDSKLFKEIVDYKVVEHHQRLKLAAEGGLPA* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0993 628 PANTHER PUTATIVE ATP-ASE 1 625 IPR039188 GO:0005739|GO:0007005
Tpr2g0993 628 Gene3D - 335 533 IPR027417 -
Tpr2g0993 628 Pfam ATPase family associated with various cellular activities (AAA) 389 515 IPR003959 GO:0005524|GO:0016887
Tpr2g0993 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 372 611 IPR027417 -
Tpr2g0993 628 Pfam ATPase family AAA domain-containing protein 3, N-terminal 51 317 IPR021911 -
Tpr2g0993 628 MobiDBLite consensus disorder prediction 39 72 - -
Tpr2g0993 628 ProSitePatterns AAA-protein family signature. 488 507 IPR003960 GO:0005524|GO:0016887
Tpr2g0993 628 SMART AAA_5 385 518 IPR003593 -
Tpr2g0993 628 Coils Coil 175 217 - -
Tpr2g0993 628 MobiDBLite consensus disorder prediction 175 209 - -
Tpr2g0993 628 CDD AAA 381 515 - -
Tpr2g0993 628 MobiDBLite consensus disorder prediction 175 192 - -
Tpr2g0993 628 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN 1 625 - -
Tpr2g0993 628 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0993 Tpr-Chr2 11879271 11886682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0993 387 592 Miscellaneous Gene Families AT5G53170 31.628 1.38e-14 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0993 K17681 - gmx:100777755 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0993 2 11879271 11886682 Tpr2g0993 2 11879271 11886682 ECH