Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0981 ATGGTGCACAGTGCATACGATTGTTTAGAACTCGTCTCCAATTTCAACGGCAAGATCGAAGCAATCCAATCCTACGGTTCAAAGCTTCTACTCGGTTGCTCCGATGGATCTCTCCGAATTTACTCACCGGAAACTGAATCCTCCGATCATTCAAAACCTTACTTGCTTGAAAAGAACCTTACTGGTTTCGCGAAGAAGCCTATTGTTTCAATGGAAGTTGTTGAATCCAGAGAACTCCTTTTATCGCTCTCTGAATCCATCGCTTTTCATAGACTTTCTAGTTTGGAAACTATAGCAGTTATTACTAAAGCTAAAGGTGCTAACGTTTTTTGCTGGGATGATCGGAGAGGGTTTCTTTGTTTCGCGAGGCAAAAGCGCGTTTGCATTTTCAGACATGATGGTGGTAGGGGATTTGTGGAGGTGAAAGAGTTTGGTGTACCGGATGTGGTGAAGTCTATGAGTTGGTGTGGGGAGAATATATGTTTGGGGATTAGAAGAGAATATATGATTTTGAATACTTCAAACGGTGCTTTGTCTGAGGTTTTTACTTCTGGGAGACTAGCGCCGCCTTTAGTAGTGCCGCTTCCATCTGGGGAGCTGCTTCTTGGAAAGGAGAACATTGGGGTCTTTGTGGATCAAAATGGGAAACTTATTCCTGAAGGCAGGATTTTATGGTCAGAGGCGCCCTTGGAAGTTGTGATTCAGAAGCCGTATGCTATTGCTTTGCTGTCCAGATTCGTGGAGATTCGTTCTCTTCGACAACCTTATCCATTGATACAAACTATTGTTCTTCGCAATGTTCGTCATCTTTGCCAAAGCAGTAATTCCGTGATACTTGCTTTGGATAATTCTATTCAAGGCCTCTTCCCCGTTCCTCTTGGAGCCCAGATTGTCCAACTAACTGCTTCTGGCAACTTTGAAGAGGCTTTGTCATTGTGCAAGCTCCTTCCACCTGAAGAGTCAAGTCTACGTGCTGCAAAGGAGGGATCAATTCATATAAGATATGCCCATTATCTTTTTGAGAACGGAAGCTATGAGGATGCTATGGACCATTTTCTGGCATCTCAAGTAGATATAACCTATGTGCTTTCTCTTTATCCATCCATTATCCTTCCAAAGACAACTATTGTTCATGAGCCAGAGAAGTTGGACATTGAAAGGGATGCTTCCCATCTCTCCAGAGTTTCGTCAGGTCTTTCAGATGATATGGAACCCTCATCATCTGAAGAGAGTGCAGCACTTGAATCCAAAAAAACAAACCATAATATGCTTATGGGTCTCATAAAATATTTACAGAAGAAGCGAGGCAATTTTATTGAGAAGGCTACTGCAGAGGGGACTGAAGAAGTTGTCTTAGACGCAGTTGGGGATAGCTTTGCATCCTACAATAGGTTTAAGAAAGCAAACAAGGGGCGTGGTAATATTTCGGTTGGTTCTGTAGCTCGGGAGTTGGCTGCAATATTAGATACTGCTCTACTCCAAGCATTGCTTCTTACTGGACAGACTTCAGCGGCTTTAGAATTGCTTAGAGGTGTTAATTACTGTGATATGAAAATATGTGAAGAAATACTCCGGAAAGGCAACCTTAATGTTGCTTTATTAGAACTTTACAAGTGCAAGTCATTGCACCGACAAGCTCTTGAACTTCTTCACAAGTTGGTGGAAGAGTCAATATCCAGTCAGTCTGAAATCACACAAAGGTTCAAGCCTGAGGACATCGTTGAATATCTCAAGCCACTATGTGAGACAGACCCCATACTTGTTCTGGAATTCTCAATGCTTGTTCTTGAAAGCTGTCCATCCCAAACTATTGAGCTCTTTCTGTCCGGAAATATACCAGCGGATATGGTGAATTCATATTTGAAGCAGCACTCTCCAAACATGCAAGCTAGGTACTTGGAGCTCATGCTTGCGATGAATGAGAATGCCATATCTGGCAATCTGCAAAACGAAATGGTAAACATCTACCTATCTGAAGTACTTGATTGGCATGCTGACTTAAATGCTCAACAAAATTGGGACGAGAAAACTTACACCCCAACTAGGAAAAAATTATTGTCGGCTTTAGAAGGTATATCAGGATACAATCCAGAGGTTCTGCTGAAACGTCTTCCTCAAGATGCTTTATACGAAGAGCGTGCATTATTGTTGGGAAAAATGAACCAACATGAACTGGCGTTGGCTCTGTATGTACATAAGCTTCATGTTCCAGAATTGGCATTATCCTATTGTGATCGGGTGTACGAGTCTATGCATCAGCCATCTGTAAAAAATTCAAGAAACATATACCTATTGCTTCTGCAAATCTATTTGAATCCTCGAAGGACCACAGCAAGCTTTGAAAATATAATTTCACATCTATTATTAACCTCACCAAGTTCAGCCATGTCTAGAGTTAGTTCAACATCTGTAAAAAGCAAAGGAGGCCGAGGAACCAAGAAAATTGCTGAGATTGAGGGTGCAGAGGACTCAAAAGTTAGTTTGAGCAGCACTGACAGTAGCAAGAGTGATGGTGATACGGATGAATTTAATGAGGGTGGCTCTACTATCATGCTTGATGAGGTCCTTGACCTGTTGAGCCGCAGGTGGGATAGAATAAATGGAGCTCAGGCCCTTAAACTTTTACCAAGAGAGACTAAGTTACAGGATTTGCTATCATTTCTTGGACCCCTTTTGAGAAAATCTAGTGAAATGTACCGTAACTATTCGGTGATCAAGAGCTTGAGACAGAGTGAGAACCTTCAGGTGAAAGATGAACTGTATAGTCAGAGGAAATCAGTTGTAAAGGTAACTGGCGATAGCATGTGTTCTCTGTGCCGAAAGAAAATAGGGACTAGTGTTTTTGCTGTCTACCCCAACGGGAGCACTCTTGTGCACTTCGTCTGTTTTAAAGATTCTCAAAATATGAAAGCAGTGACCAAAGGGACTCAATTGAGGAAGCGATAA 2946 0.4196 MVHSAYDCLELVSNFNGKIEAIQSYGSKLLLGCSDGSLRIYSPETESSDHSKPYLLEKNLTGFAKKPIVSMEVVESRELLLSLSESIAFHRLSSLETIAVITKAKGANVFCWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKEFGVPDVVKSMSWCGENICLGIRREYMILNTSNGALSEVFTSGRLAPPLVVPLPSGELLLGKENIGVFVDQNGKLIPEGRILWSEAPLEVVIQKPYAIALLSRFVEIRSLRQPYPLIQTIVLRNVRHLCQSSNSVILALDNSIQGLFPVPLGAQIVQLTASGNFEEALSLCKLLPPEESSLRAAKEGSIHIRYAHYLFENGSYEDAMDHFLASQVDITYVLSLYPSIILPKTTIVHEPEKLDIERDASHLSRVSSGLSDDMEPSSSEESAALESKKTNHNMLMGLIKYLQKKRGNFIEKATAEGTEEVVLDAVGDSFASYNRFKKANKGRGNISVGSVARELAAILDTALLQALLLTGQTSAALELLRGVNYCDMKICEEILRKGNLNVALLELYKCKSLHRQALELLHKLVEESISSQSEITQRFKPEDIVEYLKPLCETDPILVLEFSMLVLESCPSQTIELFLSGNIPADMVNSYLKQHSPNMQARYLELMLAMNENAISGNLQNEMVNIYLSEVLDWHADLNAQQNWDEKTYTPTRKKLLSALEGISGYNPEVLLKRLPQDALYEERALLLGKMNQHELALALYVHKLHVPELALSYCDRVYESMHQPSVKNSRNIYLLLLQIYLNPRRTTASFENIISHLLLTSPSSAMSRVSSTSVKSKGGRGTKKIAEIEGAEDSKVSLSSTDSSKSDGDTDEFNEGGSTIMLDEVLDLLSRRWDRINGAQALKLLPRETKLQDLLSFLGPLLRKSSEMYRNYSVIKSLRQSENLQVKDELYSQRKSVVKVTGDSMCSLCRKKIGTSVFAVYPNGSTLVHFVCFKDSQNMKAVTKGTQLRKR* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0981 981 MobiDBLite consensus disorder prediction 799 844 - -
Tpr2g0981 981 MobiDBLite consensus disorder prediction 394 415 - -
Tpr2g0981 981 Pfam Region in Clathrin and VPS 616 746 IPR000547 GO:0006886|GO:0016192
Tpr2g0981 981 Pfam CNH domain 26 272 IPR001180 -
Tpr2g0981 981 Pfam Vacuolar sorting protein 39 domain 1 488 596 IPR019452 -
Tpr2g0981 981 PANTHER VACUOLAR SORTING PROTEIN 39 1 981 - -
Tpr2g0981 981 Pfam Vacuolar sorting protein 39 domain 2 856 964 IPR019453 -
Tpr2g0981 981 MobiDBLite consensus disorder prediction 394 413 - -
Tpr2g0981 981 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 591 778 IPR000547 GO:0006886|GO:0016192
Tpr2g0981 981 SUPERFAMILY WD40 repeat-like 25 167 IPR036322 GO:0005515
Tpr2g0981 981 ProSiteProfiles Citron homology (CNH) domain profile. 16 277 IPR001180 -
Tpr2g0981 981 PANTHER CNH DOMAIN CONTAINING 1 981 IPR032914 GO:0016192
Tpr2g0981 981 SMART nik_2 11 283 IPR001180 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0981 Tpr-Chr2 11744056 11750804 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0981 K20183 - gmx:100805342 1569.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0981 2 11744056 11750804 Tpr2g0981 2 11744056 11750804 ECH