Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0964 ATGAAGTGCCCATACTGTTCGGCGGCGCAAGGTCGTTGCGCCACAACGACCACCGGAAAATCCATCACAGAATGCACATCTTGCGGCCGCGTCGTAGAAGAACGACAATCCCATCCTCACCACGTATTCCACCTCCGCGCCCAAGACAATCCCCTATCTCTAGTCACATCAGATCTCCCTCTCCCCACACTCAACCAAGAACAACACACCACCGCCGCCACCACCACCACCACAAACAACGACGATGAAGAAGACCCGTTCGAACCCACGGGTTTCATAACTTCCTTCTCTACATGGTCTTTAGAGCATAATCCACTTTACCTTCAATCATCACTCTCTTTCTCTGGCTATCTTGCTGAACTCGAACGCACTCTTGAATCATCTACTTCTGCTTCGTCTTCTAGTGTTGTTGTTGATAATCTTAGGGCTTATATGCAGATTATCGATGTTTCTTCGATACTTGGATTAGATTGTGATATTTCTGATCATGCTTTTCAATTATTTAGGGATTGTTGTTCTGCTACTTGTTTGAGAAATCGTAGTGTTGAAGCTCTTGCTACTGCTGCTCTTGTTCAAGCTATTAGAGAAGCTCAAGAACCTAGAACTCTTCAGGAAATTTCAATTGCAGCCAATGTGGCGCAAAAGGAAATTGGGAAATATATCAAGATATTGGGAGAAGCTTTACAGCTAAGTCAACCTATTAACAGCAATTCTATATCAGTTCATATGCCAAGATTTTGCACTCTTCTTCAGCTCAATAAATCTGCTCAGGAACTGGCTACTCACATAGGAGACGTTGTGATCAACAAATGCTTCTGCACTCGCAGGAATCCAATTAGCATCTCAGCTGCCGCTATATATTTGGCTTGCCAACTAGAAGACAAACGCAAAACCCAGGCCGAAATTTGTAAAGTAACCGGTCTTACTGAAGTCACTCTCCGTAAAGTGTACAAAGAATTACTGGAGAATTGGGATGATTTACTTCCCTCTAATTACACCCCAGCTGTTCCGCCGGAGCGGGCATTTCCCACAACCTTAATTGCTTCTGGACGTTCTTCAACAACTAAGGTTGATGCTATAGAGGTTAGCTCTTCTCTGGACTCAGAAAATTTGCCGGAATTGAAACCAAACAAACCTAATGAGGTGTCAGTCGTGGTCCATCAGTCAAGAGGAAAGGATGAGGCCGATGGTAAAAGCAATGCTCATGCAACCCATTCCACAGCTATTCAACAGTCAACTTTTTGGCAATCCCAACATCCCAGTGCGACACAAAATCATCAAAATCAGAATATTTTAGAATCAATGGATATTGATACGTTGCAATGCAACCACCAACAACCTGAATCAATGGTAGATGTCACAAATGGTCCTGCTACAGCTAGTTCTCTAAAATCAAGCCAACTTTACAGTCCTCCTGCTTCGAGTTCAAGCTCTATTATGAGATCGTTTTCAGTTCCTCCTTCATCTGCTCCTCCAAATAATCGACTACTGCAATCCTCTAAGACAATGCCAGGTTTTCCAGAGTACTGA 1530 0.4359 MKCPYCSAAQGRCATTTTGKSITECTSCGRVVEERQSHPHHVFHLRAQDNPLSLVTSDLPLPTLNQEQHTTAATTTTTNNDDEEDPFEPTGFITSFSTWSLEHNPLYLQSSLSFSGYLAELERTLESSTSASSSSVVVDNLRAYMQIIDVSSILGLDCDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVAQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGDVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSSTTKVDAIEVSSSLDSENLPELKPNKPNEVSVVVHQSRGKDEADGKSNAHATHSTAIQQSTFWQSQHPSATQNHQNQNILESMDIDTLQCNHQQPESMVDVTNGPATASSLKSSQLYSPPASSSSSIMRSFSVPPSSAPPNNRLLQSSKTMPGFPEY* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0964 509 SMART cyclin_7 241 322 IPR013763 -
Tpr2g0964 509 SMART cyclin_7 145 226 IPR013763 -
Tpr2g0964 509 MobiDBLite consensus disorder prediction 455 501 - -
Tpr2g0964 509 MobiDBLite consensus disorder prediction 63 84 - -
Tpr2g0964 509 CDD CYCLIN 143 224 IPR013763 -
Tpr2g0964 509 Pfam Transcription factor TFIIB repeat 143 224 IPR013150 GO:0017025
Tpr2g0964 509 Pfam Transcription factor TFIIB repeat 241 322 IPR013150 GO:0017025
Tpr2g0964 509 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 505 IPR000812 GO:0006352|GO:0070897
Tpr2g0964 509 MobiDBLite consensus disorder prediction 455 509 - -
Tpr2g0964 509 Gene3D - 141 232 - -
Tpr2g0964 509 PANTHER PLANT-SPECIFIC TFIIB-RELATED PROTEIN 1 1 505 - -
Tpr2g0964 509 SUPERFAMILY Cyclin-like 142 232 IPR036915 -
Tpr2g0964 509 SUPERFAMILY Cyclin-like 239 337 IPR036915 -
Tpr2g0964 509 CDD CYCLIN 243 321 IPR013763 -
Tpr2g0964 509 MobiDBLite consensus disorder prediction 63 80 - -
Tpr2g0964 509 Gene3D - 241 337 - -
Tpr2g0964 509 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Tpr2g0964 509 PRINTS Transcription initiation factor IIB signature 187 206 IPR000812 GO:0006352|GO:0070897
Tpr2g0964 509 PRINTS Transcription initiation factor IIB signature 213 228 IPR000812 GO:0006352|GO:0070897
Tpr2g0964 509 PRINTS Transcription initiation factor IIB signature 242 260 IPR000812 GO:0006352|GO:0070897
Tpr2g0964 509 PRINTS Transcription initiation factor IIB signature 276 292 IPR000812 GO:0006352|GO:0070897
Tpr2g0964 509 PRINTS Transcription initiation factor IIB signature 308 322 IPR000812 GO:0006352|GO:0070897
Tpr2g0964 509 MobiDBLite consensus disorder prediction 364 405 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0964 K03124 - gmx:102662353 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0964 2 11584984 11587870 Tpr2g0964 2 11584984 11587870 ECH