Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0958 ATGGATTTCGACTACGACGACGACGACCTAAAACCACCGGTTACCACTTCACGACGATTCGCGCCAAAAGCATCAAAACTTAAACCTAAAAAAGAACCTCAACTCGTCCCCAAACCCGAACCACCTTCCACCAAAACAGAACCACAAGAAATTGATTTAACTGTTAAACAGAACGAAGTAGAACATACCAAGTCTGAACCTAATGGCACTGAATCATCATCCAACTTTGAAGCTAGAGAGGATGATTCAAGGACTGTTGTTTCCACAGATGTAGAAATGACTGAAGCTGTACAGGATTTCAATCATGAAGTCGTTCCAATGGATGAAGAAGACACAGTTGTTCGCGAAATTGATGTGTATTTTTCGCCTTCTATTGATGATGAAACTAAGTTGTATGTTATGCAATATCCTTTGAGACCTTCATGGCGACCGTATGAACTCGAGGAGAATTGCGAAGAGATTAGGTTGAAACCTAAAACTTCAGAGGTGCAGGTTGATTTATCTGTTGATTTGGAGTCAAGTAATATTGATAGAGACAATGCCAATGGACTCAATTATACCAAGCAGACTCTATCAACTACGTGGAAACCACCTCCTGCTAATGGCTGTGCTGTTGGGCTTCTTATGGGAGATAAGTTGCACCTTCATCCAGTTCATGCAGTTGTGCAGCTCCGACCATCACGACATTATCTTGATTCTGGGAAGGTTGCTACGTCAAAGACGCAGAATAAGCAGACGGAGCCTTCTTCTTCTTCTTCAATTGAGGAAAAGAGTGATGGTGATGAGGGCTGGGTTCCTCTCAAGTACCATGGTTGCAAGGATGATATCTCATCTAGATATTTTCAGCAAATGGTGGCACACAAAAGTTCTCCCATAAACTTTGAAATGAGCACGTATGACTACATTGGTACAATCTGTCCTGGAGGGAGCAGCAATGCTTTAGCTAAAGGTCCTTCTAAACGGTATCTCCTATCATTGCCGGTGGAAAAGCGTCTACAGACATTTCTTATTCAGGGCCTTCCACTTCATCGTTTTAGTGCTATCAAGCACTTTGCTCCTGAATACTCCGATGACGAGCTGCTCAGTTTTCTGCAGAACCATGCACTATTGCTGCGTGGATACTGGGTCCCAAAAGGTAAATTGCTGTATCCTGAGGGCGGTATAGAATTACTGGCAAGAAATTTTGTCCTCGTATCGTTTAACAAGAGTTTGAGAGTTCAGTCAGGTGAACTGAGAAAGCTCGGTGGCGAGCTTGCTAATCGTGTGAAATACTTTCTGATGCAATTTGCTTTGGAAAAACTTGATCTAAAAGAAAGAGAAATGTATTGGAAGTTCAAAGAGCTACCAGATGAGTCCTTTATAAAAGATTTTCCAATTGTTGTTAAACAACAAGAAGAAATTTATAAGATTTTGGAACGAGAGGTATCTGGTTTTGTTAGTGTTGCTGGAAAACAAAAACAAAAATCAATTAAAAATGCTGTAACAACTAGTGGTGTCAACAGTGCTCTTGTTAGATCAACAAATTCTGATCCGCCGGCAACAAGTTTGGGTGAAGATCCTCCTCCTAGGAATATGACCATGTCAAGTGAAACTCGTCATGCTCTGCCAATTGCCCTCAAGAAACTTTTTCAGACTCACAAAGTTTGCAGCTTCCAGTTGATATGCCAAGAATTGCGTGGATTGGCACTTGCCAAAACAATGCTTCCAAAAGGAGGTTCTAAAATTGATGTGGATGCAGCTAATAGTCTTGACGTTCCACAAGACGAGCTGAAGGCTGTCTTGGGTGAAGTTGCATGCGATATCCATGGTTGTTTTGTGTTAAAATCATCGAAAGATGATCTATTCAGAGATGTTGTAATTGATATGCTTCGTGGAAGTGGACCCAATGGCAAGCTAAGGAAGGCTGAGATACTTGAAGCTGCAAGGAGAAAACTCGGTAGGGATGTCCCTAACACTGAATATATCAAGGCCGTGAGTGAGTTATGCATCTCAAAAGGTTCGTATTGGGTCTTGAAAAGCGGAGATGGAAGTAAGCAATGA 2040 0.4172 MDFDYDDDDLKPPVTTSRRFAPKASKLKPKKEPQLVPKPEPPSTKTEPQEIDLTVKQNEVEHTKSEPNGTESSSNFEAREDDSRTVVSTDVEMTEAVQDFNHEVVPMDEEDTVVREIDVYFSPSIDDETKLYVMQYPLRPSWRPYELEENCEEIRLKPKTSEVQVDLSVDLESSNIDRDNANGLNYTKQTLSTTWKPPPANGCAVGLLMGDKLHLHPVHAVVQLRPSRHYLDSGKVATSKTQNKQTEPSSSSSIEEKSDGDEGWVPLKYHGCKDDISSRYFQQMVAHKSSPINFEMSTYDYIGTICPGGSSNALAKGPSKRYLLSLPVEKRLQTFLIQGLPLHRFSAIKHFAPEYSDDELLSFLQNHALLLRGYWVPKGKLLYPEGGIELLARNFVLVSFNKSLRVQSGELRKLGGELANRVKYFLMQFALEKLDLKEREMYWKFKELPDESFIKDFPIVVKQQEEIYKILEREVSGFVSVAGKQKQKSIKNAVTTSGVNSALVRSTNSDPPATSLGEDPPPRNMTMSSETRHALPIALKKLFQTHKVCSFQLICQELRGLALAKTMLPKGGSKIDVDAANSLDVPQDELKAVLGEVACDIHGCFVLKSSKDDLFRDVVIDMLRGSGPNGKLRKAEILEAARRKLGRDVPNTEYIKAVSELCISKGSYWVLKSGDGSKQ* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0958 679 PANTHER DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE RNA POLYMERASE III SUBUNIT 5 105 467 IPR006886 GO:0005634|GO:0006351
Tpr2g0958 679 MobiDBLite consensus disorder prediction 233 260 - -
Tpr2g0958 679 MobiDBLite consensus disorder prediction 234 253 - -
Tpr2g0958 679 MobiDBLite consensus disorder prediction 504 529 - -
Tpr2g0958 679 MobiDBLite consensus disorder prediction 1 86 - -
Tpr2g0958 679 Pfam RPC5 protein 109 245 IPR006886 GO:0005634|GO:0006351
Tpr2g0958 679 MobiDBLite consensus disorder prediction 52 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0958 Tpr-Chr2 11549511 11560472 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0958 K14721 - gmx:100780965 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0958 2 11549511 11560472 Tpr2g0958 2 11549511 11560472 ECH