Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0956 ATGCTAGCCACCACCGCTCTCTATATAGTAGACACCTTTGCTAAGTGCAAAATCACTACAATAGTTTTTTCCAACTTCAAAATGGAGCCTAAAAAATCTTTCTTATCTTCCAAATTTTCATTCTTGTTGATTTTCTTTCTTATTACCATTTCCTTGTGTGGATTGAATGCATCAAGTGAGGAGCAGAATGTGAAGTCTCACAAGGGACCTGTGGTGAAGAGGGATCAAAGAAGGACATTAGTTGACACTGAATATGGAGAGATTTCTGCCACTGATGTCAAAGAAGGACAAAATAAAACACCAAATTATCATATTCAGTTCTTTACATTGGAACCTAACTCTGTGTTTCTTCCTGTGCTTTTACATGCAGCTATGGTCTTTTATGTTCATACAGGTAGTGGAAAGCTGAGTTGGGCAAATGAAGATGGAACTAGCACAATAGATATACATGAAGGAGATGTAGCCAGTCTCAAAGAAGGATCTGTTTTCTATATACACAGCAACTTGGAACCACAAAGGAAGAAACTAAGGATTTATGCAATTTTTACCAATAGAGATGATAGCACTTTTGATCCATCAATTGGTGCTTACTCAAGGATCAATGAACTAATCAAAGGCTTTGATGAAAAAATCATCCAAGCAGCTTTTAAGGTGCCTGAAGATTTGACTGAAGCAATCACAAACAAGACTGAGACACCAGCAATAGTGCATGCAGTTCCAGAGAAAAAGCATAACAATGTCTTGGAATTGGAGGCTTCACTTCTTGAATACTTCACAGGCATTGAATCCAACTCCAAGAAGCTCAAAACATACAACATCTTTGATAATGACCCTGACTTCAAAAATTGTTATGGTTGGACTTCAACAGTGACCAAAAAGCAACTAAAACGATTAAAGAGTCACAACATTGGAGTTTTCATGGTGAACTTGACCAGGGGATCAATGTTGGGGCCACATTGGAATCCATTGGCAACAGAAGTAGCAGTGGTGTTGGAAGGGAAAGGTATGGTGAGAGTAGTATGTGGTAGCAACACTGATGATGAATGCAAAAACCAGAGGTTTAGAGTTAAGCAAGGAGATGTTTTTGTGGTTTCTAGGTTTCATCCAATGGCTCAAATATCATTTGATAATGAGCCACTTGTTTTTATGGGATTCAGCACTGCTGCAAAGAAAAATTATCCTCAGTTTTTGGCTGGTGAAGGATCAGTGCTGCAAATTCTTGACAGACAGATAGTTGCTACCTCTTTAGGTGTAAATAAAACAACCATTGACAAGCTTTTGGAGAACCCGGATGATTCAATTATTTTCGAGTGTAGTTCTTGTGCGGAGGAAGAGGAAAAGCTAATGGAGGAAGAAAAGGAGAAGGAAAGGGAGGAGGAAGAGAAGAGGAAGAGAGAGGAAGAGGAGGAAGATGAGAAAAGGAGAGAAAAAGAGGAGGAAGAGGAAAAGGAGAGAGAAAGAAAAGAAAAAGAAGAGGAGGAAGTTAGAAGAAGAGAAGAAGAAAGGAAACGAGAGGAGGAAGAAGCTAGAAGGCAACAAGAAGAGAGGGAAAGGAGGAGGAAAGAAGAAGAGGAAGCAAGGAGGGAACGAGAAGAAATTAGAAGACGGAAAGAAAAGGAAAGAGAAGAAGAAGCGGAGAGGGAGGAAGAAGAAGCTAGAAGACAACAAGAGAAAAGGGAAAGGAAAGAGGAAGAAGCTAGGAGAGAAAAAGAAAGGGAAAAAGAGGAAGCTAGAAAGCAACAAGAGAAATGGGAAAGAAGAGAGGAGGAAGCTAAGAGAGAAATAGAAAGAAAAAAGAGGAGAAAAGAGGAAATAGAAAGGGAGAAAGAAAGGAAAAGAGAAGAGGCAGAGAGCGAGGAAGAAGCAGCTGAAAGACAACAAGAAAAAAGGGAAAGGAAAGAGGAGGAAGAGGAAGCTAAAAGAGAAATAGAAAGGGAAAAGAGGAGACAAGAGGAAAAAGAAAGGAAAAGAGAAGAGGCAGAGAGCGAGGAAGAAGCAGCTAGAAAACAACAAGAGAAAAGGGAAAGGAAACGAGAAGAGAGCAGAAGAAAAGAGAAAACAAAAAGGGAACAAGAAGATGAAACAGAAGAACAAGAAGAAGACACTGAGAGCCAAAGTAGAGGAAGAGGAGGACAGGGGAGACAAAGGGGTGGGGACAGAGAAAGAAGAAGCAGAGAAGAAGCATCAACAGAATGGGAAGAAGAAGAAGAAGCAGCAGCCAGAAGACAACAAGAAGAGAGGGAAAGGAAAAGAGAGCAAGAAAGTGAGAGCAGCTTTGAAGGAAGGAGAATTCTGAAAATCCGAAAAGGCGTGTGA 2316 0.4028 MLATTALYIVDTFAKCKITTIVFSNFKMEPKKSFLSSKFSFLLIFFLITISLCGLNASSEEQNVKSHKGPVVKRDQRRTLVDTEYGEISATDVKEGQNKTPNYHIQFFTLEPNSVFLPVLLHAAMVFYVHTGSGKLSWANEDGTSTIDIHEGDVASLKEGSVFYIHSNLEPQRKKLRIYAIFTNRDDSTFDPSIGAYSRINELIKGFDEKIIQAAFKVPEDLTEAITNKTETPAIVHAVPEKKHNNVLELEASLLEYFTGIESNSKKLKTYNIFDNDPDFKNCYGWTSTVTKKQLKRLKSHNIGVFMVNLTRGSMLGPHWNPLATEVAVVLEGKGMVRVVCGSNTDDECKNQRFRVKQGDVFVVSRFHPMAQISFDNEPLVFMGFSTAAKKNYPQFLAGEGSVLQILDRQIVATSLGVNKTTIDKLLENPDDSIIFECSSCAEEEEKLMEEEKEKEREEEEKRKREEEEEDEKRREKEEEEEKERERKEKEEEEVRRREEERKREEEEARRQQEERERRRKEEEEARREREEIRRRKEKEREEEAEREEEEARRQQEKRERKEEEARREKEREKEEARKQQEKWERREEEAKREIERKKRRKEEIEREKERKREEAESEEEAAERQQEKRERKEEEEEAKREIEREKRRQEEKERKREEAESEEEAARKQQEKRERKREESRRKEKTKREQEDETEEQEEDTESQSRGRGGQGRQRGGDRERRSREEASTEWEEEEEAAARRQQEERERKREQESESSFEGRRILKIRKGV* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0956 771 MobiDBLite consensus disorder prediction 447 771 - -
Tpr2g0956 771 CDD cupin_7S_vicilin-like_N 80 242 - -
Tpr2g0956 771 PANTHER PREPROMP73 36 469 - -
Tpr2g0956 771 SMART Cupin_1_3 271 424 IPR006045 -
Tpr2g0956 771 Coils Coil 439 701 - -
Tpr2g0956 771 Pfam Cupin 271 422 IPR006045 -
Tpr2g0956 771 Coils Coil 733 756 - -
Tpr2g0956 771 MobiDBLite consensus disorder prediction 702 771 - -
Tpr2g0956 771 CDD cupin_7S_vicilin-like_C 278 433 - -
Tpr2g0956 771 MobiDBLite consensus disorder prediction 447 693 - -
Tpr2g0956 771 Gene3D Jelly Rolls 60 250 IPR014710 -
Tpr2g0956 771 SUPERFAMILY RmlC-like cupins 73 430 IPR011051 -
Tpr2g0956 771 PANTHER OS03G0336100 PROTEIN-RELATED 36 469 - -
Tpr2g0956 771 Gene3D Jelly Rolls 258 440 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0956 Tpr-Chr2 11538381 11542452 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0956 71 467 Miscellaneous Gene Families AT4G36700 45.952 1.35e-122 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0956 - - cam:101506263 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0956 2 11538381 11542452 Tpr2g0956 2 11538381 11542452 ECH