Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0938 ATGGATAATTCTTCAAAGGTTATTCAAACCCTTAATTTCTACCTTTCCGAACACCCTTCCATCGTTGGATTCCGATGGAGCGACACACAACGTTGGGGTTCCACATGGTGTTTCCTCATTACCGCCATAACAATTTACATTATAACATCTCTTTTTCTCCACCTTTTATTAACTCTTCTTCTTCGCCATACCAAACCCGTTCCTCTTGGTCCTTTACCTGCACTTCATTATCTCACCGTCTCCATCGTATCCACCATCATATTTTTTGGAATATTATTCTCCACCGTTGTTGAAATCAAAGAAACACGTTGGTTTTGGCATCGGTCAAAAACTCCTCTTCAATGGCTCCTTTGTTTTCCACTAGGTACTCGTCCTTCAGGCCGCGTTTTCTTTTGGTCTTATATTTTCTACCTATCTCGTTTCCTTCATATGTTTATAACATTTTTCGTCATTCTAAGACGTCGTAAACTAGTTTTCTTTCAACTCTTTTATCATTGCATTTCCACTTTCATGTCTTTCTTGTGGCTAGAATTCTCGCAATCATTTCAAGTGCTTGCGATTCTTTTCACCACTCTTGCATATTCCGTTATGTATGGTTATAGATTTTGGACTGCGTTTGGGTTGCGCGGCGCATGTTTCTTCCCAGTTGTGTTGAACTTTCAAATGGTGTTGTTGGGATGTAACATTGTTTGTCATGTTGGAGTTCTTTTGTTGCATTTTTTTAATGGTGGGTGTAATGGAATTGGTGCTTGGGTTTTCAATTCTATTTTGAATGGGGCCATTTTGTTGTTATTTGTTAATTTTTATGTGAGGGCTTATCTTGGCAAAAGAAAGAAGATTAACGGTGTCAATAAGGAAGCAGATGCCAACAAATTGAAGTCTAATTGA 888 0.384 MDNSSKVIQTLNFYLSEHPSIVGFRWSDTQRWGSTWCFLITAITIYIITSLFLHLLLTLLLRHTKPVPLGPLPALHYLTVSIVSTIIFFGILFSTVVEIKETRWFWHRSKTPLQWLLCFPLGTRPSGRVFFWSYIFYLSRFLHMFITFFVILRRRKLVFFQLFYHCISTFMSFLWLEFSQSFQVLAILFTTLAYSVMYGYRFWTAFGLRGACFFPVVLNFQMVLLGCNIVCHVGVLLLHFFNGGCNGIGAWVFNSILNGAILLLFVNFYVRAYLGKRKKINGVNKEADANKLKSN* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0938 295 Pfam GNS1/SUR4 family 34 279 IPR002076 GO:0009922|GO:0016021
Tpr2g0938 295 PANTHER GNS1/SUR4 MEMBRANE FAMILY PROTEIN 6 283 - -
Tpr2g0938 295 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 6 283 IPR002076 GO:0009922|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0938 Tpr-Chr2 11334179 11335348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0938 4 258 Acyl Lipid Metabolism Gene Families AT4G36830 62.646 4.16e-117 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0938 - - gmx:100782066 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0938 2 11334179 11335348 Tpr2g0938 2 11334179 11335348 ECH
Tpr2g0938 2 11334179 11335348 Tpr4g4129 4 48237335 48238737 ECH
Tpr2g0938 2 11334179 11335348 Tpr4g4129 4 48237335 48238737 PCT